Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_D03
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 211 4e-55
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 211 4e-55
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 113 1e-25
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 113 1e-25
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 80 2e-15
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 80 2e-15
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 58 6e-09
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 55 7e-08
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 32 0.43
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.0
Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 211 bits (516), Expect = 4e-55
Identities = 91/140 (65%), Positives = 113/140 (80%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLK 456
+WC ++++H KA++KVREVR +LPL+S G++WD VRKCICSAYF AARLK
Sbjct: 936 KWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLK 995
Query: 455 GIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELG 276
GIGEYVN RTG+PC LHPTSALFG+G PDYVVYHEL MTA+EYM CVTAVDA WLAELG
Sbjct: 996 GIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELG 1055
Query: 275 PMFFSVKETGKSNRDKRKEA 216
PMF+S+KE+ +S ++ + E+
Sbjct: 1056 PMFYSIKESKQSRKELKMES 1075
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1
Query: 775 PSXFYXPXGREEEXXPSQREISKVPESDHLT 683
P+ F+ P GREEE +++E +VPESDHLT
Sbjct: 891 PAIFFRPKGREEEAD-AKKEKFQVPESDHLT 920
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 211 bits (516), Expect = 4e-55
Identities = 91/140 (65%), Positives = 113/140 (80%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLK 456
+WC ++++H KA++KVREVR +LPL+S G++WD VRKCICSAYF AARLK
Sbjct: 936 KWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLK 995
Query: 455 GIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELG 276
GIGEYVN RTG+PC LHPTSALFG+G PDYVVYHEL MTA+EYM CVTAVDA WLAELG
Sbjct: 996 GIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELG 1055
Query: 275 PMFFSVKETGKSNRDKRKEA 216
PMF+S+KE+ +S ++ + E+
Sbjct: 1056 PMFYSIKESKQSRKELKMES 1075
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -1
Query: 775 PSXFYXPXGREEEXXPSQREISKVPESDHLT 683
P+ F+ P GREEE +++E +VPESDHLT
Sbjct: 891 PAIFFRPKGREEEAD-AKKEKFQVPESDHLT 920
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 113 bits (273), Expect = 1e-25
Identities = 52/138 (37%), Positives = 80/138 (57%)
Frame = -3
Query: 632 WCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLKG 453
WC E+F+ ++M++ +++R +L +VSCG D V+K ICS +F+ AA+
Sbjct: 1036 WCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDP 1095
Query: 452 IGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGP 273
Y G ++HP+SA F P++VVYHEL MT +EYM VTA+D +WL E P
Sbjct: 1096 QEGYRTLTDGQNVYIHPSSACFQQ--QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAP 1153
Query: 272 MFFSVKETGKSNRDKRKE 219
FF + ++ K + KR +
Sbjct: 1154 SFFKIGDSTKLSTFKRNQ 1171
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 113 bits (273), Expect = 1e-25
Identities = 52/138 (37%), Positives = 80/138 (57%)
Frame = -3
Query: 632 WCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLKG 453
WC E+F+ ++M++ +++R +L +VSCG D V+K ICS +F+ AA+
Sbjct: 1036 WCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDP 1095
Query: 452 IGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGP 273
Y G ++HP+SA F P++VVYHEL MT +EYM VTA+D +WL E P
Sbjct: 1096 QEGYRTLTDGQNVYIHPSSACFQQ--QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAP 1153
Query: 272 MFFSVKETGKSNRDKRKE 219
FF + ++ K + KR +
Sbjct: 1154 SFFKIGDSTKLSTFKRNQ 1171
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/136 (29%), Positives = 68/136 (50%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLK 456
+WC E++V + M++ R+VR + S TD +RK I + YF ++L
Sbjct: 862 RWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLD 920
Query: 455 GIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELG 276
G Y + H HP S LF +P +VVY EL T++E+M ++ +++ WL E+
Sbjct: 921 NTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVA 978
Query: 275 PMFFSVKETGKSNRDK 228
P ++ +E + K
Sbjct: 979 PHYYKGRELEDATNKK 994
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/136 (29%), Positives = 68/136 (50%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLK 456
+WC E++V + M++ R+VR + S TD +RK I + YF ++L
Sbjct: 862 RWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLD 920
Query: 455 GIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELG 276
G Y + H HP S LF +P +VVY EL T++E+M ++ +++ WL E+
Sbjct: 921 NTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVA 978
Query: 275 PMFFSVKETGKSNRDK 228
P ++ +E + K
Sbjct: 979 PHYYKGRELEDATNKK 994
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/136 (29%), Positives = 68/136 (50%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDTVRKCICSAYFQQAARLK 456
+WC E++V + M++ R+VR + S TD +RK I + YF ++L
Sbjct: 862 RWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLD 920
Query: 455 GIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELG 276
G Y + H HP S LF +P +VVY EL T++E+M ++ +++ WL E+
Sbjct: 921 NTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVA 978
Query: 275 PMFFSVKETGKSNRDK 228
P ++ +E + K
Sbjct: 979 PHYYKGRELEDATNKK 994
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDT------VRKCICSAYFQ 474
QWC ++F++ + M+ VR L VS TD+ + +RK + + +F
Sbjct: 586 QWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVS--TDFKSRDYYLNIRKALVAGFFM 643
Query: 473 QAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDAR 294
Q A L+ G YV + +LHP++ L P++ +Y+E +T + ++ VT V
Sbjct: 644 QVAHLERSGHYVTVKDNQLVNLHPSTVL---DHKPEWALYNEFVLTTKNFIRTVTDVRPE 700
Query: 293 WLAELGPMFFSV 258
WL ++ P ++ +
Sbjct: 701 WLLQIAPQYYDL 712
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCG---TDWDTVRKCICSAYFQQAA 465
+WC++HFV+ + + + VR + VS + +R+C+ + +F QAA
Sbjct: 582 KWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAA 641
Query: 464 RLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLA 285
+ G+Y+ + P +++ S++ P +V++ E+ ++ + VT ++ WL
Sbjct: 642 QYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEV---MQDSIRDVTVIEPEWLY 698
Query: 284 ELGPMFFSVKETGK 243
EL P ++ G+
Sbjct: 699 ELAPHYYEFGTEGE 712
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Frame = -3
Query: 635 QWCTEHFVHAKAMRKVREVRXXXXXXXXXQRLPLVSCGTDWDT------VRKCICSAYFQ 474
QWC ++F++ + M+ VR L VS TD+ + +RK + + +F
Sbjct: 586 QWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVS--TDFKSRDYYLNIRKALVAGFFM 643
Query: 473 QAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAV 303
Q A L+ G YV + +LHP++ L P++ +Y+E +T + ++ VT V
Sbjct: 644 QVAHLERSGHYVTVKDNQLVNLHPSTV---LDHKPEWALYNEFVLTTKNFIRTVTDV 697
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 371 PDYVVYHELT-MTAREYMHCVTAVDARWLAELGPMFFSVKETGKS 240
P++V+Y EL + ++ M V AVD WL+ L + + E K+
Sbjct: 955 PEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQDKN 999
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 306 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 473
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 704 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 759
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 306 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 473
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 530 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 585
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 553 NSSGCRSCPAAPTGTP 506
+SSGC +CPA P G+P
Sbjct: 134 SSSGCITCPAGPMGSP 149
>Z49967-4|CAA90250.1| 287|Caenorhabditis elegans Hypothetical
protein F54C9.4 protein.
Length = 287
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 634 SGARSTSFTRRR*GKCARFASX*RAXCNSSGCRSCPAAPTGTPSG 500
S +RS +F K + + S NS GC P P G P G
Sbjct: 66 SESRSAAFASVFRNKRSAYPSQCNCDANSQGCPPGPPGPPGLPGG 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,213
Number of Sequences: 27780
Number of extensions: 286590
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -