Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_D01
         (799 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p pro...   262   5e-70
AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine...   262   5e-70
AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA ...   262   5e-70
D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life typ...    29   9.7  
AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p pro...    29   9.7  
AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,...    29   9.7  
AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,...    29   9.7  
AE013599-879|AAF58925.1|  301|Drosophila melanogaster CG1874-PA ...    29   9.7  

>BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p
           protein.
          Length = 408

 Score =  262 bits (641), Expect = 5e-70
 Identities = 124/210 (59%), Positives = 145/210 (69%)
 Frame = -1

Query: 754 WNTAVVIRTPGNVIGKHXKNHIXESRRF*RNPNXYMEGNTXHPVFATRYGKIAVNXXFGR 575
           WNTAVVI   G  +GKH KNHI     F      YMEGNT HPVF T +GK+AVN  +GR
Sbjct: 201 WNTAVVISNSGRYLGKHRKNHIPRVGDF-NESTYYMEGNTGHPVFETEFGKLAVNICYGR 259

Query: 574 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           HH  NWMMFG NGAEIVFNPSATI     SE +W++EARNAAI N YFT  INRVG E+F
Sbjct: 260 HHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTVPINRVGTEQF 317

Query: 394 PNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRR 215
           PNE+TS DG  AHK+ G FYGSSY   PDG R P LSR +DGLL+  +DLNL RQ++D  
Sbjct: 318 PNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFW 377

Query: 214 CYYMTQRLDMYVNSLSKVLELDYKPQVVHE 125
            + MTQR+ +Y  S  K  E  +KPQ++ E
Sbjct: 378 GFRMTQRVPLYAESFKKASEHGFKPQIIKE 407



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 786 LERDEKHSDILGTLRLSLGHPET*SGSXARTTXPRVGDFN 667
           LERD +H + +    + + +     G   +   PRVGDFN
Sbjct: 190 LERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFN 229


>AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine
           synthase protein.
          Length = 386

 Score =  262 bits (641), Expect = 5e-70
 Identities = 124/210 (59%), Positives = 145/210 (69%)
 Frame = -1

Query: 754 WNTAVVIRTPGNVIGKHXKNHIXESRRF*RNPNXYMEGNTXHPVFATRYGKIAVNXXFGR 575
           WNTAVVI   G  +GKH KNHI     F      YMEGNT HPVF T +GK+AVN  +GR
Sbjct: 179 WNTAVVISNSGRYLGKHRKNHIPRVGDF-NESTYYMEGNTGHPVFETEFGKLAVNICYGR 237

Query: 574 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           HH  NWMMFG NGAEIVFNPSATI     SE +W++EARNAAI N YFT  INRVG E+F
Sbjct: 238 HHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTVPINRVGTEQF 295

Query: 394 PNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRR 215
           PNE+TS DG  AHK+ G FYGSSY   PDG R P LSR +DGLL+  +DLNL RQ++D  
Sbjct: 296 PNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFW 355

Query: 214 CYYMTQRLDMYVNSLSKVLELDYKPQVVHE 125
            + MTQR+ +Y  S  K  E  +KPQ++ E
Sbjct: 356 GFRMTQRVPLYAESFKKASEHGFKPQIIKE 385



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 786 LERDEKHSDILGTLRLSLGHPET*SGSXARTTXPRVGDFN 667
           LERD +H + +    + + +     G   +   PRVGDFN
Sbjct: 168 LERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFN 207


>AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA
           protein.
          Length = 386

 Score =  262 bits (641), Expect = 5e-70
 Identities = 124/210 (59%), Positives = 145/210 (69%)
 Frame = -1

Query: 754 WNTAVVIRTPGNVIGKHXKNHIXESRRF*RNPNXYMEGNTXHPVFATRYGKIAVNXXFGR 575
           WNTAVVI   G  +GKH KNHI     F      YMEGNT HPVF T +GK+AVN  +GR
Sbjct: 179 WNTAVVISNSGRYLGKHRKNHIPRVGDF-NESTYYMEGNTGHPVFETEFGKLAVNICYGR 237

Query: 574 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           HH  NWMMFG NGAEIVFNPSATI     SE +W++EARNAAI N YFT  INRVG E+F
Sbjct: 238 HHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTVPINRVGTEQF 295

Query: 394 PNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRR 215
           PNE+TS DG  AHK+ G FYGSSY   PDG R P LSR +DGLL+  +DLNL RQ++D  
Sbjct: 296 PNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFW 355

Query: 214 CYYMTQRLDMYVNSLSKVLELDYKPQVVHE 125
            + MTQR+ +Y  S  K  E  +KPQ++ E
Sbjct: 356 GFRMTQRVPLYAESFKKASEHGFKPQIIKE 385



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 786 LERDEKHSDILGTLRLSLGHPET*SGSXARTTXPRVGDFN 667
           LERD +H + +    + + +     G   +   PRVGDFN
Sbjct: 168 LERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFN 207


>D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life type 2
           protein.
          Length = 2044

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 160 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 255
           V+C DC R+C  + SC N  CL +    S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524


>AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p
           protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 160 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 255
           V+C DC R+C  + SC N  CL +    S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524


>AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,
           isoform A protein.
          Length = 2052

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 160 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 255
           V+C DC R+C  + SC N  CL +    S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524


>AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,
           isoform C protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 160 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 255
           V+C DC R+C  + SC N  CL +    S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524


>AE013599-879|AAF58925.1|  301|Drosophila melanogaster CG1874-PA
           protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 514 SATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEE 398
           +ATIAG G SE     EA   + ++ +   A+N VG E+
Sbjct: 229 TATIAGAGASETDAEAEATTNSNSSSFEADALNEVGIED 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,529,698
Number of Sequences: 53049
Number of extensions: 691151
Number of successful extensions: 2316
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)