Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_D01
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 247 6e-66
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.1
U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine rece... 28 8.9
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 247 bits (605), Expect = 6e-66
Identities = 118/210 (56%), Positives = 140/210 (66%)
Frame = -1
Query: 754 WNTAVVIRTPGNVIGKHXKNHIXESRRF*RNPNXYMEGNTXHPVFATRYGKIAVNXXFGR 575
WNTAVVI G VIG+ KNHI F YME HPVF T+YG+I +N +GR
Sbjct: 180 WNTAVVISHTGRVIGRSRKNHIPRVGDF-NESTYYMESTLGHPVFETKYGRIGINICYGR 238
Query: 574 HHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
HH NWMM+ NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E F
Sbjct: 239 HHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVF 296
Query: 394 PNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRR 215
PNEFTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D
Sbjct: 297 PNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAW 356
Query: 214 CYYMTQRLDMYVNSLSKVLELDYKPQVVHE 125
+ MT RLDMY +++V DY+P + E
Sbjct: 357 GFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 795 SXXLERDEKHSDILGTLRLSLGHPET*SGSXARTTXPRVGDFN 667
S LERDE+ D++ + + H G + PRVGDFN
Sbjct: 166 SPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFN 208
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 461 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEXXVHRDLAVSGREYRMXGV 640
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++ G+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPT-PFMSRDELIDNSVRKLAGM 79
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 175 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 282
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine
receptor, class w protein117 protein.
Length = 372
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 696 FLXCFPITFPGVLMTTAVFQVCPNASR 776
F CFP GV++T A+F + + SR
Sbjct: 100 FFECFPTDTYGVILTRAIFDIVNDYSR 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,879,739
Number of Sequences: 27780
Number of extensions: 336452
Number of successful extensions: 975
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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