Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_C15
(804 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 48 1e-07
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 48 1e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 48 1e-07
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 40 3e-05
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 31 0.017
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 190
V LPC G P P++TW + ++ + R++ L G L I + +D EY+C EN F
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTF 1352
Query: 189 GSE 181
G +
Sbjct: 1353 GHD 1355
Score = 39.9 bits (89), Expect = 3e-05
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 4/182 (2%)
Frame = -1
Query: 720 PGTTIELTCEAAGSPAXSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 550
PG ++ L C A+G+P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 549 TTSQDVYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNR 370
T +Y C + + + E S R ++ L + G
Sbjct: 463 TNDGGLYKC-------------IAASKVGSAEHSARLNVYGLP--FIRHMDKKAIVAGET 507
Query: 369 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL-LWSDMDEYTCQAENA 193
+ + C V G+P I W V + N + KV +G L+I ++ SD YTC A NA
Sbjct: 508 LRVTCPVAGYPIESIVWERDTRV-LPINRKQKVFPNGTLIIENVERMSDQATYTCVARNA 566
Query: 192 FG 187
G
Sbjct: 567 QG 568
Score = 32.7 bits (71), Expect = 0.004
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -1
Query: 378 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMK-VLRSGELVISSLLWSDMDE----- 217
G V+ C+ +G+P+P I W + P ++ VL +G LV D +
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQ 77
Query: 216 -YTCQAENAFGS 184
Y+C A + GS
Sbjct: 78 VYSCLARSPAGS 89
Score = 32.7 bits (71), Expect = 0.004
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = -1
Query: 378 GNRVVLPCRVKGHPKPKITWFN------GQNVPIE-KNPRMKVLRSGELVISSLLWSDMD 220
G+ + C+ G PKP++TW G ++ NP + V G L I+++ ++
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISV-EDGTLSINNIQKTNEG 751
Query: 219 EYTCQAENAFGS 184
Y C+A N G+
Sbjct: 752 YYLCEAVNGIGA 763
Score = 30.3 bits (65), Expect = 0.022
Identities = 50/191 (26%), Positives = 71/191 (37%), Gaps = 5/191 (2%)
Frame = -1
Query: 726 ILPGTTIELTCEAAGSPAXSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRT 547
I+ G T+ +TC AG P S+ W + D+ V + + P I + V R
Sbjct: 502 IVAGETLRVTCPVAGYPIESIVW-ERDTRVLPINRKQKVF----PNGTLIIEN---VERM 553
Query: 546 TSQDVYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIV-VSYSTYVDNIGNR 370
+ Q YTC+ SA E + P P I S++ N G
Sbjct: 554 SDQATYTCVARNAQGY-----------SARGTLEVQVMVP--PTIQQFSFTKLPMNAGEF 600
Query: 369 VVLPCRVKGHPKP-KITW-FNGQNVPIEKNPRMKVL--RSGELVISSLLWSDMDEYTCQA 202
L C V P I W + G+ + K + R L+IS + EY C A
Sbjct: 601 ANLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGEYVCTA 660
Query: 201 ENAFGSEKAKT 169
ENA G+ T
Sbjct: 661 ENAAGTASHST 671
Score = 30.3 bits (65), Expect = 0.022
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Frame = -1
Query: 420 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM----KVLRSG- 259
P + G VL C +G I W N + + + + R ++L +G
Sbjct: 777 PHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGV 836
Query: 258 --ELVISSLLWSDMDEYTCQAENAFGSE 181
+L I SD +TC A NAFGS+
Sbjct: 837 LSDLSIKRTERSDSALFTCVATNAFGSD 864
Score = 28.3 bits (60), Expect = 0.088
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = -1
Query: 420 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV 250
P+I +++ G + L C G+P P+ITW +G+ + + ++ V +G++V
Sbjct: 394 PQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVV 453
Query: 249 ----ISSLLWSDMDEYTCQAENAFGS 184
ISS +D Y C A + GS
Sbjct: 454 SHLNISSTHTNDGGLYKCIAASKVGS 479
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 750 KAPYRRTHILPGTTIELTCEAAGSPAXSVHWFKND 646
K P R GT + C+A G+P + W + D
Sbjct: 7 KEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRAD 41
Score = 24.6 bits (51), Expect = 1.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 399 STYVDNIGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDM 223
ST + G C V+G+P ++W +G+ + +E+ VLR I S+ D
Sbjct: 315 STQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPLGLEE----AVLR-----IESVKKEDK 365
Query: 222 DEYTCQAENAFGSEKA 175
Y C N S +A
Sbjct: 366 GMYQCFVRNDQESAQA 381
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 708 IELTCEAAGSPAXSVHW 658
++L C A G PA V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 190
L C G P + W+ GQ I + +++L SGEL++S+L D +YTCQ ENA
Sbjct: 1333 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQ 1390
Query: 189 GSEK 178
G++K
Sbjct: 1391 GNDK 1394
Score = 41.1 bits (92), Expect = 1e-05
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 10/179 (5%)
Frame = -1
Query: 690 AAGSPAXSVHWFKN-DSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDV--YTCL 520
AAG P ++ W K+ SP + + N L ++ + + SS L +T ++ YTC+
Sbjct: 635 AAGDPPLTISWLKDGQSP---FPLPPN-LASANISQLDPYSSLLSITNLAAEHSGDYTCV 690
Query: 519 XXXXXXXXXXXTVVYNTDSATELSERAKL-FPLKPRIVVSYSTYVDNIGNRVVLPCRVKG 343
+ A E+ AKL + PR +V + V L C+ +G
Sbjct: 691 A---------------ANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQG 735
Query: 342 HPKPKITWF------NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGS 184
P P I W +G+ + + K+L +G L++ + Y CQA N GS
Sbjct: 736 VPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGS 794
Score = 40.7 bits (91), Expect = 2e-05
Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Frame = -1
Query: 720 PGTTIELTCEAAGSPAXSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 541
PG + L C AAG+P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 540 QD--VYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRV 367
+D Y+C+ N + R ++ L ++ T V G +
Sbjct: 492 EDGGEYSCMAE-------------NRAGKVTHAARLNVYGLPYIRLIPKVTAV--AGETL 536
Query: 366 VLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL-LWSDMDEYTCQAENAF 190
L C V G+P +I W N + + R KVL G LVI+S+ D YTC A N
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQ 595
Query: 189 G 187
G
Sbjct: 596 G 596
Score = 37.9 bits (84), Expect = 1e-04
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Frame = -1
Query: 708 IELTCEAAGSPAXSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 535
+ L C+A G P ++ W K S EY+ EL + + T I + L+ + +
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 782
Query: 534 VYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 355
Y C V +S+ + ++L +K G+ L C
Sbjct: 783 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 829
Query: 354 RVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYTCQA 202
V G +TW G + + N R+ V R +L ISS SD Y CQA
Sbjct: 830 EVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQA 889
Query: 201 ENAFGSEK 178
N +G ++
Sbjct: 890 SNLYGRDQ 897
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -1
Query: 456 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPR 280
+ S +L P ++ S+ G V L C G+P P++TW +G +P
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFM 469
Query: 279 M--KVLRSGELV----ISSLLWSDMDEYTCQAENAFG 187
+ V G+++ IS ++ D EY+C AEN G
Sbjct: 470 IGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAG 506
Score = 29.1 bits (62), Expect = 0.050
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 205
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 204 AENAFG 187
A N+ G
Sbjct: 110 ASNSVG 115
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 747 APYRRTHILPGTTIELTCEAAGSPAXSVHWFK 652
AP R + G T L CE G +V W K
Sbjct: 812 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 843
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 702 LTCEAAGSPAXSVHWFKND 646
L C A GSP ++ W D
Sbjct: 50 LDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 190
L C G P + W+ GQ I + +++L SGEL++S+L D +YTCQ ENA
Sbjct: 1329 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQ 1386
Query: 189 GSEK 178
G++K
Sbjct: 1387 GNDK 1390
Score = 40.7 bits (91), Expect = 2e-05
Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Frame = -1
Query: 720 PGTTIELTCEAAGSPAXSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 541
PG + L C AAG+P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 540 QD--VYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRV 367
+D Y+C+ N + R ++ L ++ T V G +
Sbjct: 492 EDGGEYSCMAE-------------NRAGKVTHAARLNVYGLPYIRLIPKVTAV--AGETL 536
Query: 366 VLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL-LWSDMDEYTCQAENAF 190
L C V G+P +I W N + + R KVL G LVI+S+ D YTC A N
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQ 595
Query: 189 G 187
G
Sbjct: 596 G 596
Score = 38.3 bits (85), Expect = 8e-05
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = -1
Query: 462 ATELSERAKLFP-LKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF------NGQN 304
A E+S +L + PR +V + V L C+ +G P P I W +G+
Sbjct: 691 AAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEY 750
Query: 303 VPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGS 184
+ + K+L +G L++ + Y CQA N GS
Sbjct: 751 EELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIGS 790
Score = 37.9 bits (84), Expect = 1e-04
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 11/188 (5%)
Frame = -1
Query: 708 IELTCEAAGSPAXSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 535
+ L C+A G P ++ W K S EY+ EL + + T I + L+ + +
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 778
Query: 534 VYTCLXXXXXXXXXXXTVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 355
Y C V +S+ + ++L +K G+ L C
Sbjct: 779 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 825
Query: 354 RVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYTCQA 202
V G +TW G + + N R+ V R +L ISS SD Y CQA
Sbjct: 826 EVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQA 885
Query: 201 ENAFGSEK 178
N +G ++
Sbjct: 886 SNLYGRDQ 893
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -1
Query: 456 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPR 280
+ S +L P ++ S+ G V L C G+P P++TW +G +P
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFM 469
Query: 279 M--KVLRSGELV----ISSLLWSDMDEYTCQAENAFG 187
+ V G+++ IS ++ D EY+C AEN G
Sbjct: 470 IGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAG 506
Score = 29.1 bits (62), Expect = 0.050
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 205
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 204 AENAFG 187
A N+ G
Sbjct: 110 ASNSVG 115
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 747 APYRRTHILPGTTIELTCEAAGSPAXSVHWFK 652
AP R + G T L CE G +V W K
Sbjct: 808 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 839
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 702 LTCEAAGSPAXSVHWFKND 646
L C A GSP ++ W D
Sbjct: 50 LDCTATGSPPLNIDWSTAD 68
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 39.9 bits (89), Expect = 3e-05
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 381 IGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQ 205
+G+ V + C V G P P + W NG ++ P ++V G L ++ + YTC
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCH 383
Query: 204 A 202
A
Sbjct: 384 A 384
Score = 35.1 bits (77), Expect = 8e-04
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -1
Query: 420 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSG-ELVI 247
P + V+ + + C V G P P++ W N + + ++ + ++ +G +L+I
Sbjct: 402 PEVKVTPRFQAKRLKEEANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLII 461
Query: 246 SSLLWSDMDEYTCQAENAFG 187
++ ++D Y CQA + G
Sbjct: 462 KNVDYADTGAYMCQASSIGG 481
Score = 28.3 bits (60), Expect = 0.088
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -1
Query: 702 LTCEAAGSPAXSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 577
+ C AG P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 30.7 bits (66), Expect = 0.017
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = -1
Query: 381 IGNRVVLPCRVKGHPKPKITW-------FNGQNVPIEKNPRMKVLRSGELVISSLLWSDM 223
+G ++ C G P+P+ITW ++ + + + P ++ I D
Sbjct: 36 LGRKITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDA 95
Query: 222 DEYTCQAENAFGSEK 178
Y CQA+N + ++
Sbjct: 96 GYYECQADNQYAVDR 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,205
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 49
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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