Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_C10
(795 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 326 3e-89
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 326 3e-89
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 326 3e-89
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 326 3e-89
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 319 3e-87
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 326 bits (800), Expect = 3e-89
Identities = 159/221 (71%), Positives = 175/221 (79%)
Frame = -2
Query: 734 GTIEDKVKWXREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPVRHTKG 555
G+IEDKVKW REHLE + + + + + K K + P + KG
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEY
Sbjct: 248 LRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEY 307
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKF
Sbjct: 308 DLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKF 367
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
IDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 368 IDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 792 MKLLKQRQKKAHIMESNLPGYH-RGQSEMXQRTFGEPIPVDSVFAQDEMIDCIXXXXXXX 616
++L+KQRQKKAH+ME L G + + + +PI V +VF QDEMIDC+
Sbjct: 168 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 227
Query: 615 XXXXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 228 FKGVTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 326 bits (800), Expect = 3e-89
Identities = 159/221 (71%), Positives = 175/221 (79%)
Frame = -2
Query: 734 GTIEDKVKWXREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPVRHTKG 555
G+IEDKVKW REHLE + + + + + K K + P + KG
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEY
Sbjct: 235 LRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEY 294
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKF
Sbjct: 295 DLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKF 354
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
IDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 355 IDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 792 MKLLKQRQKKAHIMESNLPGYH-RGQSEMXQRTFGEPIPVDSVFAQDEMIDCIXXXXXXX 616
++L+KQRQKKAH+ME L G + + + +PI V +VF QDEMIDC+
Sbjct: 155 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 214
Query: 615 XXXXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 215 FKGVTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 326 bits (800), Expect = 3e-89
Identities = 159/221 (71%), Positives = 175/221 (79%)
Frame = -2
Query: 734 GTIEDKVKWXREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPVRHTKG 555
G+IEDKVKW REHLE + + + + + K K + P + KG
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEY
Sbjct: 235 LRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEY 294
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKF
Sbjct: 295 DLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKF 354
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
IDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 355 IDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 792 MKLLKQRQKKAHIMESNLPGYH-RGQSEMXQRTFGEPIPVDSVFAQDEMIDCIXXXXXXX 616
++L+KQRQKKAH+ME L G + + + +PI V +VF QDEMIDC+
Sbjct: 155 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 214
Query: 615 XXXXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 215 FKGVTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 326 bits (800), Expect = 3e-89
Identities = 159/221 (71%), Positives = 175/221 (79%)
Frame = -2
Query: 734 GTIEDKVKWXREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPVRHTKG 555
G+IEDKVKW REHLE + + + + + K K + P + KG
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEY
Sbjct: 248 LRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEY 307
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKF
Sbjct: 308 DLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKF 367
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
IDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 368 IDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 792 MKLLKQRQKKAHIMESNLPGYH-RGQSEMXQRTFGEPIPVDSVFAQDEMIDCIXXXXXXX 616
++L+KQRQKKAH+ME L G + + + +PI V +VF QDEMIDC+
Sbjct: 168 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 227
Query: 615 XXXXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 228 FKGVTSRWHTKKLPRKTHKG 247
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 319 bits (783), Expect = 3e-87
Identities = 155/215 (72%), Positives = 171/215 (79%)
Frame = -2
Query: 734 GTIEDKVKWXREHLENLSLSILCLPKMK*LTALVSPRAKDTKVSLLVGTQRSYPVRHTKG 555
G+IEDKVKW REHLE + + + + + K K + P + KG
Sbjct: 199 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 258
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEY
Sbjct: 259 LRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEY 318
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKF
Sbjct: 319 DLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKF 378
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
IDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 379 IDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 792 MKLLKQRQKKAHIMESNLPGYH-RGQSEMXQRTFGEPIPVDSVFAQDEMIDCIXXXXXXX 616
++L+KQRQKKAH+ME L G + + + +PI V +VF QDEMIDC+
Sbjct: 179 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 238
Query: 615 XXXXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 239 FKGVTSRWHTKKLPRKTHKG 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,258,953
Number of Sequences: 53049
Number of extensions: 855229
Number of successful extensions: 2328
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2318
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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