Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_B22
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0091 - 26363070-26363361,26363467-26363625,26363708-263638...    31   0.87 
07_03_1050 - 23570785-23570824,23570938-23571004,23571114-235711...    29   6.2  

>01_06_0091 -
           26363070-26363361,26363467-26363625,26363708-26363880,
           26366639-26366810,26366912-26367294
          Length = 392

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 490 SRXRSTTGEHGAGRQRVCPGRVSGKTSWNIAQ 585
           S  R+TTG+HGAGR+R      SG  S N+ Q
Sbjct: 47  SPKRNTTGQHGAGRRRGGGSARSGLASCNMFQ 78


>07_03_1050 -
           23570785-23570824,23570938-23571004,23571114-23571196,
           23572028-23572201,23572268-23572471,23572570-23573300
          Length = 432

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 551 ASPERHLGTLPSELPPRHGSWL 616
           ASP+ HL +LPS LPP  G  L
Sbjct: 40  ASPDEHLRSLPSLLPPPPGQEL 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,316,350
Number of Sequences: 37544
Number of extensions: 219133
Number of successful extensions: 730
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)