Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_B14
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       31   1.5  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 1/95 (1%)
 Frame = -1

Query: 813 PXXPXGGGPXGXSPGXXXXXXXEXXXXGXXPHXXXTKKKXGGGGXGXXXF-XXXRXXXXX 637
           P    GGGP    PG            G        ++  GGGG G              
Sbjct: 109 PGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGA 168

Query: 636 XXXXRGGGRGXXXPXXVXTXXXGGGXXGRXXXXXG 532
                GGG G   P        GGG  GR     G
Sbjct: 169 LGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGG 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,229
Number of Sequences: 37544
Number of extensions: 310249
Number of successful extensions: 491
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)