Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_B13
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    31   1.3  
AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p pro...    29   9.4  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    29   9.4  
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.    29   9.4  

>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 276  STSSIP-LATFQLLPSIPYCTTTFRAVLKDNKTALLSASIQASLPSSEIYRQLVDP 112
            S  S+P   + Q++  IP  TTT R ++KDN +     ++ ++   S    Q VDP
Sbjct: 1529 SLESVPDQVSGQIISLIPPPTTTQRPLVKDNSSNSSPDNVDSAFDKSHTINQTVDP 1584


>AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 662  VSKNPITPRXXIHFHQSPDAVXEGSSRRGLKP--PLSSEAPSAYLTPSSLGMXKGVSP 495
            + K P TP         PD+  E SSRR   P    ++  P+  +T ++ G  K  +P
Sbjct: 1020 LEKKPATPNAAADKPIHPDSSPENSSRRSASPQSDANNSLPAVSVTAAASGKCKEETP 1077


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
            protein.
          Length = 1995

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 662  VSKNPITPRXXIHFHQSPDAVXEGSSRRGLKP--PLSSEAPSAYLTPSSLGMXKGVSP 495
            + K P TP         PD+  E SSRR   P    ++  P+  +T ++ G  K  +P
Sbjct: 1845 LEKKPATPNAAADKPIHPDSSPENSSRRSASPQSDANNSLPAVSVTAAASGKCKEETP 1902


>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
          Length = 1990

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 662  VSKNPITPRXXIHFHQSPDAVXEGSSRRGLKP--PLSSEAPSAYLTPSSLGMXKGVSP 495
            + K P TP         PD+  E SSRR   P    ++  P+  +T ++ G  K  +P
Sbjct: 1840 LEKKPATPNAAADKPIHPDSSPENSSRRSASPQSDANNSLPAVSVTAAASGKCKEETP 1897


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,149,978
Number of Sequences: 53049
Number of extensions: 557855
Number of successful extensions: 1395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)