Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_B12
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 272 3e-73
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 272 3e-73
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 272 3e-73
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 272 3e-73
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 272 3e-73
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 272 3e-73
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 272 3e-73
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 272 3e-73
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 227 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 286
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 287 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 623 QG 618
+G
Sbjct: 224 RG 225
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 227 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 286
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 287 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 623 QG 618
+G
Sbjct: 224 RG 225
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 129 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 188
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 189 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 245
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 246 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 66 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 125
Query: 623 QG 618
+G
Sbjct: 126 RG 127
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 238
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 239 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 295
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 296 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 227 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 286
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 287 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 623 QG 618
+G
Sbjct: 224 RG 225
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 129 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 188
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 189 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 245
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 246 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 66 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 125
Query: 623 QG 618
+G
Sbjct: 126 RG 127
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 238
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 239 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 295
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 296 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 272 bits (666), Expect = 3e-73
Identities = 125/173 (72%), Positives = 146/173 (84%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYR 434
G+KGVTSRWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYR
Sbjct: 227 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYR 286
Query: 433 IGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIIT 254
IG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+IT
Sbjct: 287 IGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLIT 343
Query: 253 LRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 95
LRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 344 LRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 800 AHTQRKL*NSDKRGSHY-GIQLNGGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVT 624
AHTQ K+ ++ +H IQ+NGGTIE KV W REHLEK + VD+VFAQDEMID IGVT
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 623 QG 618
+G
Sbjct: 224 RG 225
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 613 GYKGVTSRWHTKKLP-RKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 437
G++G RW + P R+T K R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 436 RI 431
RI
Sbjct: 294 RI 295
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +2
Query: 8 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 127
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,340,008
Number of Sequences: 27780
Number of extensions: 426290
Number of successful extensions: 1088
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -