Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_B07
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 151 4e-37
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 35 0.057
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 273 GFHHRTIINNKIYRIG 288
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 185 VNGGTIEQKVDWAREH 200
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 273 GFHHRTIINNKIYRIG 288
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 185 VNGGTIEQKVDWAREH 200
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 115 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 175 GFHHRTIINNKIYRIG 190
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 87 VNGGTIEQKVDWAREH 102
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 137 bits (332), Expect = 7e-33
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = -1
Query: 676 SIXCXPQDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTV 497
SI +MID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTV
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 218
Query: 496 ARAGQKGYHHRTEMNKKIYRIG 431
ARAGQKG+HHRT +N KIYRIG
Sbjct: 219 ARAGQKGFHHRTIINNKIYRIG 240
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 273 GFHHRTIINNKIYRIG 288
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 185 VNGGTIEQKVDWAREH 200
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 115 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 175 GFHHRTIINNKIYRIG 190
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 87 VNGGTIEQKVDWAREH 102
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 137 bits (332), Expect = 7e-33
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = -1
Query: 676 SIXCXPQDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTV 497
SI +MID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTV
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTV 218
Query: 496 ARAGQKGYHHRTEMNKKIYRIG 431
ARAGQKG+HHRT +N KIYRIG
Sbjct: 219 ARAGQKGFHHRTIINNKIYRIG 240
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 396 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 217
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 216 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 142 bits (343), Expect = 3e-34
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 658 QDEMIDCIGVTKXKGYQGVTFRWHTKKLPRKTHKXLRKVACIGAWHPXRVSFTVARAGQK 479
QDEMID IGVT+ G++GVT RWHTKKLPRKTHK LRKVACIGAWHP RV+FTVARAGQK
Sbjct: 213 QDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
Query: 478 GYHHRTEMNKKIYRIG 431
G+HHRT +N KIYRIG
Sbjct: 273 GFHHRTIINNKIYRIG 288
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 744 INGGTXEDKVKWXREH 697
+NGGT E KV W REH
Sbjct: 185 VNGGTIEQKVDWAREH 200
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 35.1 bits (77), Expect = 0.057
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 652 EMIDCIGVTKXKGYQGVTFRWHTKKLP-RKTHKXLRKVACIGAWHPXRVSFTVARAGQKG 476
+ + G T G+QG RW + P R+T K R++ +G+ R+ G G
Sbjct: 222 QYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMG 281
Query: 475 YHHRTEMNKKIYRI 434
Y RT +I RI
Sbjct: 282 YEWRTVSGLEIVRI 295
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 373 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 498
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,927,826
Number of Sequences: 27780
Number of extensions: 381472
Number of successful extensions: 981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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