Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_A19
         (1498 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    35   0.88 
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    35   0.88 
BC049204-1|AAH49204.1|  251|Homo sapiens homeobox B4 protein.          34   1.5  
AL137449-1|CAB70742.1|  246|Homo sapiens hypothetical protein pr...    34   1.5  
AF307160-1|AAG45052.1|  251|Homo sapiens HOXB4 protein.                34   1.5  
AF287967-4|AAG31554.1|  251|Homo sapiens homeobox B4 protein.          34   1.5  
L20969-1|AAC00042.1|  809|Homo sapiens cyclic AMP phosphodiester...    28   4.5  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    25   7.6  

>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +3

Query: 3    PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXP 122
            PPPPPPP  PP P     +        P  LP     C P
Sbjct: 931  PPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPPPYSCDP 970


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = +3

Query: 3    PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXP 122
            PPPPPPP  PP P     +        P  LP     C P
Sbjct: 931  PPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPPPYSCDP 970


>BC049204-1|AAH49204.1|  251|Homo sapiens homeobox B4 protein.
          Length = 251

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = +3

Query: 3   PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXPLXXXSXPIXXCGRNXXGP 176
           PPPPPPP  PP P                 LP     C  +   S P   C +N   P
Sbjct: 73  PPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAV-SSSPPPPPCAQNPLHP 129


>AL137449-1|CAB70742.1|  246|Homo sapiens hypothetical protein
           protein.
          Length = 246

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = +3

Query: 3   PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXPLXXXSXPIXXCGRNXXGP 176
           PPPPPPP  PP P                 LP     C  +   S P   C +N   P
Sbjct: 68  PPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAV-SSSPPPPPCAQNPLHP 124


>AF307160-1|AAG45052.1|  251|Homo sapiens HOXB4 protein.
          Length = 251

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = +3

Query: 3   PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXPLXXXSXPIXXCGRNXXGP 176
           PPPPPPP  PP P                 LP     C  +   S P   C +N   P
Sbjct: 73  PPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAV-SSSPPPPPCAQNPLHP 129


>AF287967-4|AAG31554.1|  251|Homo sapiens homeobox B4 protein.
          Length = 251

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 18/58 (31%), Positives = 20/58 (34%)
 Frame = +3

Query: 3   PPPPPPPXXPPXPXXXXXITXXCXXXXPVXLPHNNSVCXPLXXXSXPIXXCGRNXXGP 176
           PPPPPPP  PP P                 LP     C  +   S P   C +N   P
Sbjct: 73  PPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAV-SSSPPPPPCAQNPLHP 129


>L20969-1|AAC00042.1|  809|Homo sapiens cyclic AMP phosphodiesterase
           protein.
          Length = 809

 Score = 28.3 bits (60), Expect(2) = 4.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 6   PPPPPPXXPPXP 41
           PPPPPP  PP P
Sbjct: 75  PPPPPPLPPPPP 86



 Score = 22.6 bits (46), Expect(2) = 4.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 3  PPPPPPPXXP 32
          PPPPPP   P
Sbjct: 58 PPPPPPSPQP 67


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 25.4 bits (53), Expect(2) = 7.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 9   PPPPPXXPPXP 41
           PPPPP  PP P
Sbjct: 346 PPPPPPPPPLP 356



 Score = 24.6 bits (51), Expect(2) = 7.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 3   PPPPPPPXXPP 35
           PP PPPP  PP
Sbjct: 326 PPLPPPPPPPP 336


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,398,830
Number of Sequences: 237096
Number of extensions: 1828969
Number of successful extensions: 43796
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24229
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22197699270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)