Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_A15
         (830 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ...    30   8.9  
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ...    30   8.9  
M90464-1|AAA52046.1|  910|Homo sapiens alpha-5 type IV collagen ...    30   8.9  
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ...    30   8.9  
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ...    30   8.9  
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ...    30   8.9  
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ...    30   8.9  

>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
           chain protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
           chain protein.
          Length = 1691

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


>M90464-1|AAA52046.1|  910|Homo sapiens alpha-5 type IV collagen
           protein.
          Length = 910

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
           protein.
          Length = 1604

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 198 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 234


>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
           protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
           protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
           protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 663 GXEGGXSAXNGXXXLSGKRA-PGKNXXDXXPGXPGAP 556
           G  GG     G     GKR  PGK+  +  PG PG P
Sbjct: 279 GPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLP 315


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,008,175
Number of Sequences: 237096
Number of extensions: 1093165
Number of successful extensions: 4529
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4436
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)