Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_P24
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...   105   3e-23
AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical...    38   0.012
AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical...    38   0.012
AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative tyro...    33   0.35 
AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical...    28   9.9  

>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score =  105 bits (253), Expect = 3e-23
 Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
 Frame = +1

Query: 136 LAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLV 315
           LA DW  L+EL+ KKLWHQLT+  +  VK P      ++ + Y  F+  +E ++NPL LV
Sbjct: 18  LADDWKNLKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYRLFVAEWELRVNPLQLV 77

Query: 316 EIIAHIVEQYV--NKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKI 489
           EI   I +     +K+ ++ FL K+   +  N + +A+ ++  G+I   +L + D   +I
Sbjct: 78  EICISIAQNIATKDKQKSMEFLSKIGNVI--NKDKIAVARLHTGEIE-ARLENKDKNGQI 134

Query: 490 IE------HLESTLEDAD---GVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVG 630
           I+       ++ST  + D   GVT VH  FY+++S Y R  G    YYR ALRY+G
Sbjct: 135 IDLKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLYLREVGDFAGYYREALRYLG 190


>AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical
           protein D1007.5b protein.
          Length = 402

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 30/92 (32%), Positives = 48/92 (52%)
 Frame = -1

Query: 651 PSPPXGAPNVPKRCAVVTASGTTDSVIFRG*LIKSSVNWSHTISIFECTF*MFNYFLGCI 472
           P+PP  AP+VP   ++  ASG T SV      I   + ++     FECT  +F Y +   
Sbjct: 8   PAPPPQAPSVP--ASIPRASGVTLSVH----PIWPDIQFTQGELFFECT--LFLYSV-LA 58

Query: 471 IIIQLFNVYLSL*HLTQSQCFIIHFNFRFHLL 376
           + +Q  N+Y +L  L +S     H++ +FHL+
Sbjct: 59  LFLQYLNIYKTLWWLPKSYW---HYSLKFHLI 87


>AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical
           protein D1007.5a protein.
          Length = 477

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 30/92 (32%), Positives = 48/92 (52%)
 Frame = -1

Query: 651 PSPPXGAPNVPKRCAVVTASGTTDSVIFRG*LIKSSVNWSHTISIFECTF*MFNYFLGCI 472
           P+PP  AP+VP   ++  ASG T SV      I   + ++     FECT  +F Y +   
Sbjct: 8   PAPPPQAPSVP--ASIPRASGVTLSVH----PIWPDIQFTQGELFFECT--LFLYSV-LA 58

Query: 471 IIIQLFNVYLSL*HLTQSQCFIIHFNFRFHLL 376
           + +Q  N+Y +L  L +S     H++ +FHL+
Sbjct: 59  LFLQYLNIYKTLWWLPKSYW---HYSLKFHLI 87


>AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative
           tyrosine kinase receptorW04G5.6B protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 268 NFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVE-TKVKMNDEALALCK 429
           N + + E   N LSLV ++  IV +YV   D + FL K +  K  +  +  +LCK
Sbjct: 93  NVMCSMEKHPNILSLVGVVTMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKSLCK 147


>AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical
           protein Y9C9A.5 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 559 TYKIVRELESHHQHLRVYFLNVQLFSRL-HHNHSAVQCIFVLVA-PYTEPVLH 407
           TYK+VREL  H +    Y L  QLF  L       +  +F+ +   +T P+LH
Sbjct: 225 TYKLVRELSKHGESEYTYKLQSQLFRALVAQAFIPITFLFLPIGILFTAPLLH 277


>Z81098-3|CAB03179.1|  131|Caenorhabditis elegans Hypothetical
           protein K07A12.3 protein.
          Length = 131

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 130 PALAADWAKLEELYNKKLWHQLTLK 204
           PA+ ADWAKL++    K +  L++K
Sbjct: 51  PAIKADWAKLQKFIETKQYVNLSIK 75


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 331 IVEQYVNKRDAVTFLEKVETKVKMND 408
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 331 IVEQYVNKRDAVTFLEKVETKVKMND 408
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 331 IVEQYVNKRDAVTFLEKVETKVKMND 408
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical
           protein T16H12.11 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
 Frame = +1

Query: 196 TLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLV-EIIAHIVEQYVNKRDA--- 363
           T +++  ++   ++     I ++N  +  F S  N    V E IAH +E+  NK+DA   
Sbjct: 161 TKRIEHVLRQDIIREIGVAIDVHNLKIDDFRSHSNNTERVAEGIAHAIEESKNKQDAGNQ 220

Query: 364 ---VTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLESTLEDADGVT 534
              V  L K  +  +   E     + L  +   E L+D D +   +   +S+  DA  ++
Sbjct: 221 LKHVPVLSKQMSVRRWYREHYGDPQALSDESDEESLSDGDNSSLFVGTADSSSRDASDIS 280


>AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47G6A.4 protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = +3

Query: 225 SGPAEGRQPHTVVQ*LFDHLRKQN-KSPII 311
           +GPA+G +P+ V + L  HL KQ+ KSPI+
Sbjct: 279 NGPADGCEPYEVFEWL-QHLLKQHPKSPIL 307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,804,889
Number of Sequences: 27780
Number of extensions: 388661
Number of successful extensions: 1046
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)