Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_P16
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0261 + 16207565-16207825,16207935-16208087,16208191-162083...    29   5.2  
12_01_0981 + 9931542-9931606,9931779-9933105                           28   6.8  

>09_04_0261 +
           16207565-16207825,16207935-16208087,16208191-16208316,
           16208595-16208847,16209303-16209485,16209486-16209582,
           16209706-16209769,16209904-16210053,16210215-16210387,
           16210497-16210536,16211170-16211223
          Length = 517

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
 Frame = +1

Query: 409 PPPXPX----FXSPPXFXPGKXFFFFXXXGGGGG 498
           PP  P     F  PP F PG   FF     GGGG
Sbjct: 21  PPSSPGSRRGFVFPPRFAPGVFLFFPLDSAGGGG 54


>12_01_0981 + 9931542-9931606,9931779-9933105
          Length = 463

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 409 PPPXPXFXSPPXFXPGKXFF 468
           PPP P F  PP + P   FF
Sbjct: 73  PPPPPHFPQPPQYTPLNQFF 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,930
Number of Sequences: 37544
Number of extensions: 220986
Number of successful extensions: 318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)