Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_P13
(808 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 123 3e-28
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 123 3e-28
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 92 7e-19
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 82 8e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 81 2e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 77 2e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 77 2e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 68 1e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 68 1e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 67 3e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 63 5e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 3e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 3e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 3e-09
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 54 2e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 54 2e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 54 2e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 54 2e-07
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 43 4e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.005
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 36 0.065
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 34 0.26
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 33 0.61
AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p pro... 32 0.80
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 32 0.80
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 32 1.1
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 32 1.1
BT012340-1|AAS77465.1| 355|Drosophila melanogaster AT11348p pro... 31 1.4
BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p pro... 31 1.4
BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p pro... 31 1.4
AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p pro... 31 1.4
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 31 1.4
AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA... 31 1.4
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 31 1.4
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P... 31 1.4
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P... 31 1.4
BT011556-1|AAS15692.1| 293|Drosophila melanogaster AT30717p pro... 31 1.9
AE014298-807|AAF46093.1| 293|Drosophila melanogaster CG15764-PA... 31 1.9
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 2.5
BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p pro... 31 2.5
AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-P... 31 2.5
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 30 3.2
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 30 3.2
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 30 3.2
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 30 3.2
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 30 3.2
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 30 3.2
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 30 3.2
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 30 3.2
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 30 3.2
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 30 3.2
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 30 3.2
AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p pro... 30 4.3
AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-P... 30 4.3
AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC... 30 4.3
AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA... 30 4.3
AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD... 30 4.3
AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB... 30 4.3
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 7.5
Y15251-1|CAA75535.1| 943|Drosophila melanogaster RNA binding pr... 29 9.9
AY061395-1|AAL28943.1| 941|Drosophila melanogaster LD32008p pro... 29 9.9
AE014298-724|AAS65263.1| 941|Drosophila melanogaster CG3312-PB,... 29 9.9
AE014298-723|AAF46022.1| 941|Drosophila melanogaster CG3312-PA,... 29 9.9
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 29 9.9
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 29 9.9
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 29 9.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 123 bits (296), Expect = 3e-28
Identities = 59/184 (32%), Positives = 105/184 (57%)
Frame = +3
Query: 126 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 305
LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 306 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 485
K+ A+ F + R P LP R++ + D PI W ++YLG+ D +
Sbjct: 736 NKTNAIFFTKRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKK 780
Query: 486 MTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXR 665
+TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ +
Sbjct: 781 LTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQ 840
Query: 666 IHLK 677
H+K
Sbjct: 841 THIK 844
Score = 35.9 bits (79), Expect = 0.065
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 638 IVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 674
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 123 bits (296), Expect = 3e-28
Identities = 59/184 (32%), Positives = 105/184 (57%)
Frame = +3
Query: 126 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 305
LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 306 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 485
K+ A+ F + R P LP R++ + D PI W ++YLG+ D +
Sbjct: 684 NKTNAIFFTKRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKK 728
Query: 486 MTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXR 665
+TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ +
Sbjct: 729 LTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQ 788
Query: 666 IHLK 677
H+K
Sbjct: 789 THIK 792
Score = 35.9 bits (79), Expect = 0.065
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 586 IVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 622
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 92.3 bits (219), Expect = 7e-19
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Frame = +3
Query: 123 LLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKW 287
LL+ LY +D+P+ ++ LA FADD + Y R + +Q A +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 288 RIDINPTKSTAVLF--KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 461
I IN +KS V F KR PP P+ + + P+P KY
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP---------------------PVYIEEVPVPQPNAAKY 747
Query: 462 LGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 641
LGV LD R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 748 LGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGC 807
Query: 642 VVFAHAXRIHLK 677
++ A H+K
Sbjct: 808 QIWGLACDSHIK 819
Score = 36.3 bits (80), Expect = 0.049
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
+++ YL R F R S +V AGVPQGS L P
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGP 648
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 82.2 bits (194), Expect = 8e-16
Identities = 66/245 (26%), Positives = 106/245 (43%)
Frame = +3
Query: 6 DSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRSPETHLALF 185
D + C T S + + E P+ P+ L+ +Y DIP + ++ F
Sbjct: 617 DRKFAVRCNTATSTVHTIE------AGVPQGSVLGPT---LYLIYTADIPTNSRLTVSTF 667
Query: 186 ADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI 365
ADDTAI R +L + +W WRI +N K V F TL+
Sbjct: 668 ADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF--------TLN- 718
Query: 366 PLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGR 545
R + P P+ + P+P A +V YLGV LD R+T+R HI+ + +
Sbjct: 719 -----RQDCP-----PLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANN 768
Query: 546 LYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFSNYSIPVFAGXPSE 725
L+ +I S +SL +KV LY + ++P+ TY S ++ +A ++ +
Sbjct: 769 LHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
Query: 726 PPWVR 740
P +VR
Sbjct: 829 PWYVR 833
Score = 37.1 bits (82), Expect = 0.028
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 2 TGLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVS 163
T +++ YL +R F R S + AGVPQGS L P T+ +Y P +
Sbjct: 607 THKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGP-TLYLIYTADIPTN 659
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 80.6 bits (190), Expect = 2e-15
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Frame = +3
Query: 123 LLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
LL+S++ D+P H LA +ADD A+ YS R LQ TT+ W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
++W + +NP K+ F TL P AP + DQP + K
Sbjct: 710 KRWILKVNPQKTINPCF--------TLKTLSPV-----TAPIELEGVILDQP----SQAK 752
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLG+TLD R+TF PH+K R + +L ++ R+S M+LR K +Y C+ P+ Y
Sbjct: 753 YLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYG 812
Query: 639 SVVFAHAXR 665
++ A +
Sbjct: 813 IQIWGIAAK 821
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
+++ YL +R F RV + S PR + AGVPQGS L P
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGP 649
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 77.4 bits (182), Expect = 2e-14
Identities = 57/184 (30%), Positives = 85/184 (46%)
Frame = +3
Query: 123 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 302
+L++LY D P + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 303 PTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDS 482
K V F TL+ P P+ + + IP A +V YLGV LD
Sbjct: 705 VQKCKQVTF--------TLN--------KQTCP---PLVLNNICIPQADEVTYLGVHLDR 745
Query: 483 RMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAX 662
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 663 RIHL 674
R ++
Sbjct: 806 RSNI 809
Score = 38.3 bits (85), Expect = 0.012
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 2 TGLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
T +++ YL NR F R + + SR + AGVPQGS L P
Sbjct: 605 THKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 77.4 bits (182), Expect = 2e-14
Identities = 57/184 (30%), Positives = 85/184 (46%)
Frame = +3
Query: 123 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 302
+L++LY D P + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 303 PTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDS 482
K V F TL+ P P+ + + IP A +V YLGV LD
Sbjct: 705 VQKCKQVTF--------TLN--------KQTCP---PLVLNNICIPQADEVTYLGVHLDR 745
Query: 483 RMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAX 662
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 663 RIHL 674
R ++
Sbjct: 806 RSNI 809
Score = 35.9 bits (79), Expect = 0.065
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 2 TGLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
T +++ YL N F R + + SR + AGVPQGS L P
Sbjct: 605 THKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 68.1 bits (159), Expect = 1e-11
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Frame = +3
Query: 126 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFR 281
L+S++ +D+P +P T +A +ADDTA+ + LQ QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 282 KWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 461
W + IN K V F N T S P +++ + I KY
Sbjct: 712 NWNVRINAEKCANVTFA-----NRTGSCP--------------GVSLNGRLIRHHQAYKY 752
Query: 462 LGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 641
LG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 753 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 812
Query: 642 VVFAHAXRIHL 674
V+ A + HL
Sbjct: 813 QVYGIAAKSHL 823
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTP 157
L+++ +L R+F V+G +S + + AGVPQGS L P T+ V+ P
Sbjct: 613 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLYSVFASDMP 661
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 68.1 bits (159), Expect = 1e-11
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Frame = +3
Query: 126 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFR 281
L+S++ +D+P +P T +A +ADDTA+ + LQ QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 282 KWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 461
W + IN K V F N T S P +++ + I KY
Sbjct: 514 NWNVRINAEKCANVTFA-----NRTGSCP--------------GVSLNGRLIRHHQAYKY 554
Query: 462 LGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 641
LG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 555 LGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL 614
Query: 642 VVFAHAXRIHL 674
V+ A + HL
Sbjct: 615 QVYGIAAKSHL 625
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTP 157
L+++ +L R+F V+G +S + + AGVPQGS L P T+ V+ P
Sbjct: 415 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLYSVFASDMP 463
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 66.9 bits (156), Expect = 3e-11
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
LL+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V+F TL LPT +N + + Q I K
Sbjct: 767 DKWGISVNAAKTGHVIF--------TLKNDLPTNSMN--------VKIKGQTIKKESKQS 810
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGVTLDS++T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 811 YLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 668 IILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 706
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 62.9 bits (146), Expect = 5e-10
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
LL+S++ +D+P SP + L +ADDT + S R + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V+F TL LPT ++R + + Q I K
Sbjct: 755 DKWGISVNAAKTGHVIF--------TLKNDLPT--------SLRTMKIKGQVIKIESKQS 798
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 656 IILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 694
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 60.1 bits (139), Expect = 3e-09
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V++ TL +PT ++ + + Q I K
Sbjct: 639 DKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKGQAIKKESKQS 682
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 683 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 540 IILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 578
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V++ TL +PT ++ + + Q I K
Sbjct: 755 DKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKGQAIKKESKQS 798
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 656 IILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V++ TL +PT ++ + + Q I K
Sbjct: 755 DKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKGQAIKKESKQS 798
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 656 IILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 60.1 bits (139), Expect = 3e-09
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V++ TL +PT ++ + + Q I K
Sbjct: 717 DKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKGQAIKKESKQS 760
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 761 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 618 IILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 656
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.1 bits (139), Expect = 3e-09
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Frame = +3
Query: 123 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 278
+L+S++ +D+P SP + L +ADDT + S R + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 279 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 458
KW I +N K+ V++ TL +PT ++ + + Q I K
Sbjct: 755 DKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKGQAIKKESKQS 798
Query: 459 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 638
YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 121
+I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 656 IILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 54.4 bits (125), Expect = 2e-07
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Frame = +3
Query: 33 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 173
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 224 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 280
Query: 174 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 344
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 281 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 340
Query: 345 PNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDR 524
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 341 QTNIYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGK 384
Query: 525 AAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVF 650
+L +I + S + K+ L+K + P+ YA ++
Sbjct: 385 TIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIW 426
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 121
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 213 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 250
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 2e-07
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Frame = +3
Query: 33 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 173
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 174 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 344
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 345 PNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDR 524
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 788 QTNIYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGK 831
Query: 525 AAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVF 650
+L +I + S + K+ L+K + P+ YA ++
Sbjct: 832 TIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIW 873
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 121
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 2e-07
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Frame = +3
Query: 33 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 173
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 174 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 344
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 345 PNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDR 524
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 788 QTNIYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGK 831
Query: 525 AAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVF 650
+L +I + S + K+ L+K + P+ YA ++
Sbjct: 832 TIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIW 873
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 121
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 2e-07
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Frame = +3
Query: 33 TVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPRS-----------PETH-- 173
+VR D E+ R+ P+ P +L+S+Y +D+P P+ H
Sbjct: 671 SVRIDGETTSRIGNIRAGVPQGSILGP---VLYSIYSSDMPYPIVKDYMRNISFPDYHPT 727
Query: 174 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP 344
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 728 NIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKE 787
Query: 345 PNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDR 524
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 788 QTNIYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGK 831
Query: 525 AAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVF 650
+L +I + S + K+ L+K + P+ YA ++
Sbjct: 832 TIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIW 873
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 121
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +3
Query: 429 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYK 608
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 609 TCIRPVMTYA 638
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +3
Query: 396 APAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSK 575
AP VR + +P+ +YLG+T+ M F HI ++R R ++G L ++
Sbjct: 718 APTVR---FAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWG 774
Query: 576 MSLRNKVTLYKTCIRPVMTYASVVF 650
S R + T+Y + P + + + V+
Sbjct: 775 FSPRARRTIYDGLMAPCVLFGAPVW 799
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 35.9 bits (79), Expect = 0.065
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 118
+I+ +++NRSFR R+ S + G+PQGS LS
Sbjct: 613 LIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLS 648
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 33.9 bits (74), Expect = 0.26
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
+++ YL R F R + S + AGVPQGS L P
Sbjct: 149 LLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGP 185
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 123 LLFSLYINDIPRSPETHLALFADDTAI 203
+L++LY DIP + + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 32.7 bits (71), Expect = 0.61
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + C++ P RS
Sbjct: 887 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRS 946
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S S +T TPR S+ G TPR + + T P + C+ SP RS
Sbjct: 471 STSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSGPTTTTPRSTTTTCTCSPTTTTPRS 530
Query: 457 NI*ASPST 480
+PST
Sbjct: 531 T--TTPST 536
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 599 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 658
Query: 457 NI*ASPS 477
S S
Sbjct: 659 TTTTSTS 665
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 615 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 674
Query: 457 NI*ASPS 477
S S
Sbjct: 675 TTTTSTS 681
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 631 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 690
Query: 457 NI*ASPS 477
S S
Sbjct: 691 TTTTSTS 697
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 647 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 706
Query: 457 NI*ASPS 477
S S
Sbjct: 707 TTTTSTS 713
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 663 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 722
Query: 457 NI*ASPS 477
S S
Sbjct: 723 TTTTSTS 729
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 679 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 738
Query: 457 NI*ASPS 477
S S
Sbjct: 739 TTTTSTS 745
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 695 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 754
Query: 457 NI*ASPS 477
S S
Sbjct: 755 TTTTSTS 761
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 711 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 770
Query: 457 NI*ASPS 477
S S
Sbjct: 771 TTTTSTS 777
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 727 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 786
Query: 457 NI*ASPS 477
S S
Sbjct: 787 TTTTSTS 793
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 743 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 802
Query: 457 NI*ASPS 477
S S
Sbjct: 803 TTTTSTS 809
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 759 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 818
Query: 457 NI*ASPS 477
S S
Sbjct: 819 TTTTSTS 825
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 775 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 834
Query: 457 NI*ASPS 477
S S
Sbjct: 835 TTTTSTS 841
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 791 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 850
Query: 457 NI*ASPS 477
S S
Sbjct: 851 TTTTSTS 857
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 807 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 866
Query: 457 NI*ASPS 477
S S
Sbjct: 867 TTTTSTS 873
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 823 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 882
Query: 457 NI*ASPS 477
S S
Sbjct: 883 TTTTSTS 889
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 839 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 898
Query: 457 NI*ASPS 477
S S
Sbjct: 899 TTTTSTS 905
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 277 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 456
S SG +T TPR S+ G TPR + + T P + ++ P RS
Sbjct: 855 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 914
Query: 457 NI*ASPS 477
S S
Sbjct: 915 TTTTSTS 921
Score = 28.7 bits (61), Expect = 9.9
Identities = 29/115 (25%), Positives = 39/115 (33%), Gaps = 3/115 (2%)
Frame = +1
Query: 142 STIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGA---STLTPRK 312
ST P P ++P T TT R RP S + + +T TPR
Sbjct: 359 STCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRS 418
Query: 313 AQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPS 477
S+ TPR + + T P + C+ SP RS S S
Sbjct: 419 TTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTS 473
>AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p
protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 9 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYI 143
+S+ T+ T S S + P+TS P A PSP L F L++
Sbjct: 56 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFV 100
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 9 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYI 143
+S+ T+ T S S + P+TS P A PSP L F L++
Sbjct: 887 TSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFV 931
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R ++ SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSVPGSPATA--RKSPTPQRFEPPPLGF 169
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 11 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVS 163
+I +Y +R Y E G RS V+AGVPQGS L P +Y +S
Sbjct: 586 VIGNYFRDRVLWYVTEDGPRSH--QVSAGVPQGSVLGPILWNIMYDGILSIS 635
Score = 31.1 bits (67), Expect = 1.9
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Frame = +3
Query: 153 PRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFK 332
PR E H FADD AI + L A T +W K + I K+ VL
Sbjct: 637 PRGVELHC--FADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVL-- 692
Query: 333 RGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKT 512
L +R+ +R + + I A +KYLGV +D R++F+ H +
Sbjct: 693 ------------LSSRK---SVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHARY 736
Query: 513 VRDRAAF---ILGRLYPMI 560
+AA L R+ P +
Sbjct: 737 ASKKAAMTAAALARIMPNV 755
>BT012340-1|AAS77465.1| 355|Drosophila melanogaster AT11348p
protein.
Length = 355
Score = 31.5 bits (68), Expect = 1.4
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P+
Sbjct: 256 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTSQESLSKNKSGSAPAPTPTPRGPF 315
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P DSGS + G S L P K Q
Sbjct: 316 RTAPSNTEFIKRRPAKDSGSRNETQSTPGESELDPTKPQ 354
>BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p
protein.
Length = 381
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 208 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 372
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 4 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 63
Query: 373 RLGASITPPPPFAQSRCSTSPYRGPR 450
R G + P P + R + +P + R
Sbjct: 64 R-GETPEPTTPSSVKRTARTPAKNTR 88
>BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 352 PR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 531
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 532 S 534
+
Sbjct: 624 T 624
>AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p
protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 208 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 372
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 14 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 73
Query: 373 RLGASITPPPPFAQSRCSTSPYRGPR 450
R G + P P + R + +P + R
Sbjct: 74 R-GETPEPTTPSSVKRTARTPAKNTR 98
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 218 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 316
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 352 PR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 531
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 532 S 534
+
Sbjct: 624 T 624
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 218 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 316
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
isoform A protein.
Length = 1420
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 208 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 372
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 4 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 63
Query: 373 RLGASITPPPPFAQSRCSTSPYRGPR 450
R G + P P + R + +P + R
Sbjct: 64 R-GETPEPTTPSSVKRTARTPAKNTR 88
>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
isoform B protein.
Length = 1430
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 208 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 372
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 14 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 73
Query: 373 RLGASITPPPPFAQSRCSTSPYRGPR 450
R G + P P + R + +P + R
Sbjct: 74 R-GETPEPTTPSSVKRTARTPAKNTR 98
>BT011556-1|AAS15692.1| 293|Drosophila melanogaster AT30717p
protein.
Length = 293
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 292 STLTPR---KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRC 423
S+L PR KA + LRTPR +TPPPP RC
Sbjct: 83 SSLAPRPAPKAFKMRKTDTHLRTPRVVQCKTARIPVTPPPPPPSPRC 129
>AE014298-807|AAF46093.1| 293|Drosophila melanogaster CG15764-PA
protein.
Length = 293
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 292 STLTPR---KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRC 423
S+L PR KA + LRTPR +TPPPP RC
Sbjct: 83 SSLAPRPAPKAFKMRKTDTHLRTPRVVQCKTARIPVTPPPPPPSPRC 129
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 14 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 118
I++++SNR RV S P + G+PQGS +S
Sbjct: 606 IKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPIS 640
>BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 336 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 452
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-PA
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 336 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 452
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 30.3 bits (65), Expect = 3.2
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 2/202 (0%)
Frame = +1
Query: 34 PFVPISSRGNAFP--APSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPST 207
P SS G A P +PS + SP P Y S ++ P +S+ +P S+
Sbjct: 1586 PNYTASSPGGASPNYSPSSPNYSPTS----PLYASPRYASTTPNFNP---QSTGYSPSSS 1638
Query: 208 TRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGAS 387
+ + Q P S +GSG++ +P A SS + +P S S S
Sbjct: 1639 GYSPTSPVYSPTVQFQSSP--SFAGSGSNIYSPGNAYSPSSSNYSPNSP---SYSPTSPS 1693
Query: 388 ITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF*DVSTR*YAG 567
+P P S TSP P SPS +PTS Y V PS+ S A
Sbjct: 1694 YSPSSP---SYSPTSPCYSP------TSPSY-----SPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 568 EVKCPLEIR*HSTKLAYAPS*P 633
P T + Y+P+ P
Sbjct: 1740 PQYSPASPAYSQTGVKYSPTSP 1761
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 30.3 bits (65), Expect = 3.2
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 2/202 (0%)
Frame = +1
Query: 34 PFVPISSRGNAFP--APSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPST 207
P SS G A P +PS + SP P Y S ++ P +S+ +P S+
Sbjct: 105 PNYTASSPGGASPNYSPSSPNYSPTS----PLYASPRYASTTPNFNP---QSTGYSPSSS 157
Query: 208 TRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGAS 387
+ + Q P S +GSG++ +P A SS + +P S S S
Sbjct: 158 GYSPTSPVYSPTVQFQSSP--SFAGSGSNIYSPGNAYSPSSSNYSPNSP---SYSPTSPS 212
Query: 388 ITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF*DVSTR*YAG 567
+P P S TSP P SPS +PTS Y V PS+ S A
Sbjct: 213 YSPSSP---SYSPTSPCYSP------TSPSY-----SPTSPNYTPVTPSYSPTSPNYSAS 258
Query: 568 EVKCPLEIR*HSTKLAYAPS*P 633
P T + Y+P+ P
Sbjct: 259 PQYSPASPAYSQTGVKYSPTSP 280
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 30.3 bits (65), Expect = 3.2
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 2/202 (0%)
Frame = +1
Query: 34 PFVPISSRGNAFP--APSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPST 207
P SS G A P +PS + SP P Y S ++ P +S+ +P S+
Sbjct: 1126 PNYTASSPGGASPNYSPSSPNYSPTS----PLYASPRYASTTPNFNP---QSTGYSPSSS 1178
Query: 208 TRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGAS 387
+ + Q P S +GSG++ +P A SS + +P S S S
Sbjct: 1179 GYSPTSPVYSPTVQFQSSP--SFAGSGSNIYSPGNAYSPSSSNYSPNSP---SYSPTSPS 1233
Query: 388 ITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF*DVSTR*YAG 567
+P P S TSP P SPS +PTS Y V PS+ S A
Sbjct: 1234 YSPSSP---SYSPTSPCYSP------TSPSY-----SPTSPNYTPVTPSYSPTSPNYSAS 1279
Query: 568 EVKCPLEIR*HSTKLAYAPS*P 633
P T + Y+P+ P
Sbjct: 1280 PQYSPASPAYSQTGVKYSPTSP 1301
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 14 IRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPXTIQFVY 142
IR Y SNR E + RH VT GVPQGS L P +Y
Sbjct: 25 IRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMY 66
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 300 NPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAP 401
N + ++ +L K+ R PNT + LPT PAP
Sbjct: 301 NQSTASVMLVKKSRNPNTITNTDLPTSSTKVPAP 334
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 30.3 bits (65), Expect = 3.2
Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 2/202 (0%)
Frame = +1
Query: 34 PFVPISSRGNAFP--APSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPST 207
P SS G A P +PS + SP P Y S ++ P +S+ +P S+
Sbjct: 1584 PNYTASSPGGASPNYSPSSPNYSPTS----PLYASPRYASTTPNFNP---QSTGYSPSSS 1636
Query: 208 TRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGAS 387
+ + Q P S +GSG++ +P A SS + +P S S S
Sbjct: 1637 GYSPTSPVYSPTVQFQSSP--SFAGSGSNIYSPGNAYSPSSSNYSPNSP---SYSPTSPS 1691
Query: 388 ITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF*DVSTR*YAG 567
+P P S TSP P SPS +PTS Y V PS+ S A
Sbjct: 1692 YSPSSP---SYSPTSPCYSP------TSPSY-----SPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 568 EVKCPLEIR*HSTKLAYAPS*P 633
P T + Y+P+ P
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSP 1759
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 379 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 537
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AY060348-1|AAL25387.1| 1282|Drosophila melanogaster GH27234p protein.
Length = 1282
Score = 29.9 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-PA
protein.
Length = 583
Score = 29.9 bits (64), Expect = 4.3
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Frame = +3
Query: 138 YINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKST 317
Y+ D+ + A D AI Y+ R + RL +A + +W R + P + T
Sbjct: 300 YVRDLMKHCGLSPATKFDRVAILYARRVPNPMPVRLSSARSLNNKWID--RSSLRPPQHT 357
Query: 318 A-------VLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPIT 419
L PP +T ++P P + + P P RP++
Sbjct: 358 KQPKHPRHALRPVCNPPPSTTTLPPPKLKPHPPCPLFRPVS 398
>AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC,
isoform C protein.
Length = 1238
Score = 29.9 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1139 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1198
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P D GS + G S L P K Q
Sbjct: 1199 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1237
>AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA,
isoform A protein.
Length = 1238
Score = 29.9 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1139 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1198
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P D GS + G S L P K Q
Sbjct: 1199 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1237
>AE014296-297|AAF47520.2| 1282|Drosophila melanogaster CG33791-PD,
isoform D protein.
Length = 1282
Score = 29.9 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014296-296|AAF47519.2| 1282|Drosophila melanogaster CG33791-PB,
isoform B protein.
Length = 1282
Score = 29.9 bits (64), Expect = 4.3
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +1
Query: 55 RGNAFPAPS-----RHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 219
R + PAPS SRSP+R P P + + ST L + S+P P++
Sbjct: 1183 RSGSAPAPSVVPRASASRSPSRKSPSPSHDGISPSTRQESLSKKKSGSAPAPTPTSRGPF 1242
Query: 220 RRRCFIDDFRPQLPPWDSGSGS------GASTLTPRKAQ 318
R +F + P D GS + G S L P K Q
Sbjct: 1243 RTAPSNTEFIKRRPAKDYGSRNETQSTPGESELDPTKPQ 1281
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 339 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 440
RPP + P TRR+ PAP P T ++P+P
Sbjct: 459 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 490
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 339 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 440
RPP + P TRR+ PAP P T ++P+P
Sbjct: 670 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 701
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 339 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 440
RPP + P TRR+ PAP P T ++P+P
Sbjct: 773 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 804
>Y15251-1|CAA75535.1| 943|Drosophila melanogaster RNA binding
protein protein.
Length = 943
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 317 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 180
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 789 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 834
>AY061395-1|AAL28943.1| 941|Drosophila melanogaster LD32008p
protein.
Length = 941
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 317 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 180
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014298-724|AAS65263.1| 941|Drosophila melanogaster CG3312-PB,
isoform B protein.
Length = 941
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 317 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 180
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014298-723|AAF46022.1| 941|Drosophila melanogaster CG3312-PA,
isoform A protein.
Length = 941
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 317 CAFRGVNVDAPLPEPLSHGGSCGLKSSMKQRLLPTRVVDGGVIGEE 180
C F+G+N+ + P G S S +R +PT ++ ++ +E
Sbjct: 787 CLFKGMNISVAISNPPPRGTSAVKPSVAPKRRVPTSLIPTTLVRQE 832
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/92 (27%), Positives = 35/92 (38%)
Frame = +1
Query: 259 PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPY 438
P S S SG ++ ++ A T R S AS+T P Q R S +
Sbjct: 22 PSARSSSESGGVGCAVGLVKKPATPTPATATTRITRSSAAAASVTASPHLQQQRSSLAIN 81
Query: 439 RGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 534
+ N AS +G +APT + PS
Sbjct: 82 NKRKSGNAKASNEPMGLSTAPTPHSTTSPNPS 113
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/92 (27%), Positives = 35/92 (38%)
Frame = +1
Query: 259 PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPY 438
P S S SG ++ ++ A T R S AS+T P Q R S +
Sbjct: 22 PSARSSSESGGVGCAVGLVKKPATPTPATATTRITRSSAAAASVTASPHLQQQRSSLAIN 81
Query: 439 RGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 534
+ N AS +G +APT + PS
Sbjct: 82 NKRKSGNAKASNEPMGLSTAPTPHSTTSPNPS 113
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/92 (27%), Positives = 35/92 (38%)
Frame = +1
Query: 259 PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPY 438
P S S SG ++ ++ A T R S AS+T P Q R S +
Sbjct: 22 PSARSSSESGGVGCAVGLVKKPATPTPATATTRITRSSAAAASVTASPHLQQQRSSLAIN 81
Query: 439 RGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 534
+ N AS +G +APT + PS
Sbjct: 82 NKRKSGNAKASNEPMGLSTAPTPHSTTSPNPS 113
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,713,908
Number of Sequences: 53049
Number of extensions: 1054728
Number of successful extensions: 3968
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 3407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3932
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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