Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_P12
(796 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 347 1e-95
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 347 1e-95
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 347 1e-95
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 336 3e-92
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 336 3e-92
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 225 7e-59
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P... 29 5.5
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 347 bits (853), Expect = 1e-95
Identities = 164/252 (65%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Frame = +2
Query: 44 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 223
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 224 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 403
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 404 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVVAHTQMKLLKQRQKKAHIMEIQL 583
W D+LG+KSIE DF+KM+RYC V+RV+AH+Q++L+KQRQKKAH+MEIQL
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 196
Query: 584 NGGTIEDKVKWARXHLEXTYPCRFCACPX*ND*LHWC--XQGXKDTKGVTSRWXPKKAXR 757
NGG+IEDKVKWAR HLE P + + D + C K KGVTSRW KK R
Sbjct: 197 NGGSIEDKVKWAREHLEK--PIQ-VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 253
Query: 758 KXTRVLXKLPAL 793
K + L K+ +
Sbjct: 254 KTHKGLRKVACI 265
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 347 bits (853), Expect = 1e-95
Identities = 164/252 (65%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Frame = +2
Query: 44 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 223
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 224 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 403
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 404 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVVAHTQMKLLKQRQKKAHIMEIQL 583
W D+LG+KSIE DF+KM+RYC V+RV+AH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 584 NGGTIEDKVKWARXHLEXTYPCRFCACPX*ND*LHWC--XQGXKDTKGVTSRWXPKKAXR 757
NGG+IEDKVKWAR HLE P + + D + C K KGVTSRW KK R
Sbjct: 186 NGGSIEDKVKWAREHLEK--PIQ-VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 242
Query: 758 KXTRVLXKLPAL 793
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 347 bits (853), Expect = 1e-95
Identities = 164/252 (65%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Frame = +2
Query: 44 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 223
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 224 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 403
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 404 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVVAHTQMKLLKQRQKKAHIMEIQL 583
W D+LG+KSIE DF+KM+RYC V+RV+AH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 584 NGGTIEDKVKWARXHLEXTYPCRFCACPX*ND*LHWC--XQGXKDTKGVTSRWXPKKAXR 757
NGG+IEDKVKWAR HLE P + + D + C K KGVTSRW KK R
Sbjct: 186 NGGSIEDKVKWAREHLEK--PIQ-VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 242
Query: 758 KXTRVLXKLPAL 793
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 336 bits (825), Expect = 3e-92
Identities = 159/244 (65%), Positives = 186/244 (76%), Gaps = 2/244 (0%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIRYCSVVRVVAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 607
W D+LG+KSIE DF+KM+RYC V+RV+AH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 608 VKWARXHLEXTYPCRFCACPX*ND*LHWC--XQGXKDTKGVTSRWXPKKAXRKXTRVLXK 781
VKWAR HLE P + + D + C K KGVTSRW KK RK + L K
Sbjct: 181 VKWAREHLEK--PIQ-VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK 237
Query: 782 LPAL 793
+ +
Sbjct: 238 VACI 241
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 336 bits (825), Expect = 3e-92
Identities = 159/244 (65%), Positives = 186/244 (76%), Gaps = 2/244 (0%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 427
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 428 XXXWQDELGRKSIEKDFKKMIRYCSVVRVVAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 607
W D+LG+KSIE DF+KM+RYC V+RV+AH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 608 VKWARXHLEXTYPCRFCACPX*ND*LHWC--XQGXKDTKGVTSRWXPKKAXRKXTRVLXK 781
VKWAR HLE P + + D + C K KGVTSRW KK RK + L K
Sbjct: 181 VKWAREHLEK--PIQ-VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK 237
Query: 782 LPAL 793
+ +
Sbjct: 238 VACI 241
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 225 bits (549), Expect = 7e-59
Identities = 97/118 (82%), Positives = 106/118 (89%)
Frame = +2
Query: 44 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 223
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 224 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 397
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +2
Query: 68 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 247
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 248 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 391
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
protein.
Length = 2282
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 2 TGSCDCLPACRTENFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDP 139
T +CD P C + Q P G YPK S RH K P+ DP
Sbjct: 1192 TQACDN-PFCESGG-QFPRSGENPNYPKAHSARHYSKENYQPECDP 1235
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,254,802
Number of Sequences: 53049
Number of extensions: 740598
Number of successful extensions: 1565
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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