Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_P11
(835 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 6e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 59 4e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 5e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 55 9e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 9e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 3e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 7e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 9e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 8e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 8e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 8e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.013
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.017
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.070
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.49
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.1 bits (144), Expect = 6e-12
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Frame = +2
Query: 98 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 256
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 257 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-MSSERLWRPDVVLLNAAATTAGDYAL-RAR 430
+ L+ W D + W+ E+G T L + SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 431 VSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
+ G V W + + P D QTC FGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 59.3 bits (137), Expect = 4e-11
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 289
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 290 IDKRLSWNAGEWGCSTWLMSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 460
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 461 KRLDISTPISMQXDXXPNDMQTCTFXFGS 547
RL I M + P D Q C FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.0 bits (134), Expect = 1e-10
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 116 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 274
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-MSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 448
++ +W D +L W+ E+G L + S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 449 VSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
V W + + + P D QTC FGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.6 bits (133), Expect = 1e-10
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLMSSERLWR 367
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 368 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTF 535
PD+VL N A G+Y +R + + NG V W+ + ++ P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 536 XFGS 547
FGS
Sbjct: 168 KFGS 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 5e-10
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 307
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 308 WNAGEWGCSTWL-MSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 481
W E+G L + S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 482 PISMQXDXXPNDMQTCTFXFGS 547
+ + P D QTC FGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V++NGS ++ + + P D Q C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V++NGS ++ + + P D Q C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.2 bits (127), Expect = 7e-10
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Frame = +2
Query: 89 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 247
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 248 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLMSSERLWRPDVVLLNAAATTAGDYAL- 421
T + ++ W D +L WN ++G T + SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 422 ---RARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
+A + + G V W + + + P D QTC FGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 54.8 bits (126), Expect = 9e-10
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V++NGS ++ + + P D Q C FGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.8 bits (126), Expect = 9e-10
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +2
Query: 143 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 301
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 302 LSWNAGEWGCSTWL-MSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 466
L WN E+G L + SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 467 LDISTPISMQXDXXPNDMQTCTFXFGS 547
+ + + P D Q+C FGS
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGS 178
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V+++GS ++ + M P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V+++GS ++ + M P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 307
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 308 WNAGEWGCSTWL-MSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 472
W E+G L + S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 473 ISTPISMQXDXXPNDMQTCTFXFGS 547
+ S+ + P D+QTC GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V+++GS ++ + + P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V+++GS ++ + + P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAA-ATTA 406
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
G Y V+++GS ++ + + P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.0 bits (119), Expect = 7e-09
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Frame = +2
Query: 95 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 259
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 260 RIQADLQMNWIDKRLSWNAGEWGCSTWL-MSSERLWRPDVVLLNAA-ATTAGDYALRARV 433
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 434 SNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
NNG+ ++ + + P D Q C FGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Frame = +2
Query: 116 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 280
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 281 MNWIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 451
+ W L+W + E+ ++ + S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 452 SWIKRLDISTPISMQXDXXPNDMQTCTFXFGSRMH 556
+ + P D+ CT S H
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSH 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.0 bits (114), Expect = 3e-08
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +2
Query: 131 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 295
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 296 KRLSWNAGEWGCSTWLMSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 466
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 467 LDISTPISMQXDXXPNDMQTCTFXFGS 547
L I M+ P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +2
Query: 197 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLMSSERLWRPD 373
+V L+LH ++ E + + W D L WNA E+ G + R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 374 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
+L N A + VS+ G V W+ + + + P D Q C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.6 bits (108), Expect = 1e-07
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 286
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 287 WIDKRLSWNAGEW-GCSTWLMSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 454
W D LSW ++ G + + S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 455 WIKRLDISTPISMQXDXXPNDMQTCTFXFGSRMH 556
+ + + P D C FGS +H
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVH 192
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 301
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 302 LSWN--AGEWGCSTWLMSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 466
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 467 LDISTPISMQXDXXPNDMQTCTFXFGS 547
+ ++ M P D Q C+ S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 289
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 290 IDKRLSWNAGEWGCSTWLMSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 442
D RL++ G T + SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 443 GSVSWIKRLDISTPISMQXDXXPNDMQTC 529
GS++ RL I+ M P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.9 bits (94), Expect = 7e-06
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 289
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 290 IDKRLSWNAGEWGCSTWLMSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 442
D RL++ G T + SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 443 GSVSWIKRLDISTPISMQXDXXPNDMQTC 529
GS++ RL I+ M P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 9e-06
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 301
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 302 LSWN--AGEWGCSTWLMSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 466
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 467 LDISTPISMQXDXXPNDMQTCTFXFGS 547
+ ++ M P D Q C+ S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +2
Query: 236 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLMSSERLWRPDVVLLNAAATTAGDY 415
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 416 ALR---ARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCT 532
R R+S +GSV++ R + M P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 8e-04
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 283
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGCSTWLMSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
++ R + + + P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 8e-04
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 283
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGCSTWLMSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
++ R + + + P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 8e-04
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 283
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGCSTWLMSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WIKRLDISTPISMQXDXXPNDMQTCTFXFGS 547
++ R + + + P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.002
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWLMSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 439
W D RL++ G T + SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 440 NGSVSWIKRLDISTPISMQXDXXPNDMQTC 529
+GS++ RL I+ M P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.013
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +2
Query: 197 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLMSSERLWRP 370
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 371 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFG 544
D ++ R+ NG+V+++ R + + + P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 545 S 547
S
Sbjct: 257 S 257
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.7 bits (66), Expect = 0.017
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLMSSERLWRPDVVLLNAAATTA 406
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 407 GDYALRAR---VSNNGSVSWIKRLDISTPISMQXDXXPNDMQTCTFXFGSRMH 556
+ ++ + ++ ++ ++ +L + +M+ + P+D Q C+ S H
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.070
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +2
Query: 197 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLMSSER 358
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 359 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQXDXXPNDMQ 523
LW+PD LNA + AL + S+ N +V + R+ M+ P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 524 TC 529
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.49
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQXDXXPNDMQ 523
+ +WRPD NA + T + + + ++ ++ +L + +M P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 524 TCTFXFGSRMH 556
C S H
Sbjct: 176 ECKLQMESLSH 186
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 340 PSAAAPLPCVPTQS 299
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/31 (35%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Frame = +2
Query: 653 PXPXTGAKGEXPX-GXXPNXXXGXPPRXXPG 742
P P + P G PN G PP PG
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPG 53
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,840
Number of Sequences: 438
Number of extensions: 4867
Number of successful extensions: 85
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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