Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_P08
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p pro...    30   4.2  
AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-P...    30   4.2  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.4  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.4  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   9.7  
AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-P...    29   9.7  
AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-P...    29   9.7  

>BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p
           protein.
          Length = 995

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +1

Query: 493 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGVK 672
           +S+Y+  S P+A SHP  +   +Q  +   + +  P +  H  P+   +      AP   
Sbjct: 1   MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAAS---ASGAPSSS 57

Query: 673 ASVVIRGSISVSHP 714
           AS     SI V+HP
Sbjct: 58  ASASASASILVAHP 71


>AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-PB,
           isoform B protein.
          Length = 995

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +1

Query: 493 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGVK 672
           +S+Y+  S P+A SHP  +   +Q  +   + +  P +  H  P+   +      AP   
Sbjct: 1   MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAAS---ASGAPSSS 57

Query: 673 ASVVIRGSISVSHP 714
           AS     SI V+HP
Sbjct: 58  ASASASASILVAHP 71


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +1

Query: 502 YYWRSRPYAS-SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP 633
           Y    +P+ S  H P      QP HQ P    QP    HP P  P
Sbjct: 9   YQTHHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPPPPPP 53


>AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-PC,
           isoform C protein.
          Length = 1497

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 528 IKPPSPAISATSTRSSN-PRFHTPTTPDLTSISINPLNAVLKGVRAGG*SLRCHQRLHQR 704
           +K  S   S    RSS  P+ H  +TPD +     P+ A      A   S+RCH R H +
Sbjct: 301 LKTSSSDCSCGDERSSRRPQVHRKSTPDKSYYLRKPIPA------AQTCSVRCHARSHIQ 354

Query: 705 ISPP 716
             PP
Sbjct: 355 GPPP 358


>AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-PB,
            isoform B protein.
          Length = 2087

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 528  IKPPSPAISATSTRSSN-PRFHTPTTPDLTSISINPLNAVLKGVRAGG*SLRCHQRLHQR 704
            +K  S   S    RSS  P+ H  +TPD +     P+ A      A   S+RCH R H +
Sbjct: 891  LKTSSSDCSCGDERSSRRPQVHRKSTPDKSYYLRKPIPA------AQTCSVRCHARSHIQ 944

Query: 705  ISPP 716
              PP
Sbjct: 945  GPPP 948


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,635,856
Number of Sequences: 53049
Number of extensions: 790168
Number of successful extensions: 2792
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2791
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)