Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_O10
(786 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.0
BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein. 32 2.7
AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein pr... 32 2.7
AL832379-1|CAD91155.1| 1045|Homo sapiens hypothetical protein pr... 32 2.7
AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein myop... 32 2.7
AL512429-1|CAH73747.1| 1045|Homo sapiens sarcomeric protein myop... 32 2.7
AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein. 32 2.7
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.6
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.6
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.6
AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein pr... 31 3.6
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein.
Length = 658
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 562 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 615
>AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein
protein.
Length = 1391
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 633 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 686
>AL832379-1|CAD91155.1| 1045|Homo sapiens hypothetical protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 287 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 340
>AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1320
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 562 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 615
>AL512429-1|CAH73747.1| 1045|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 287 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 340
>AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein.
Length = 1320
Score = 31.9 bits (69), Expect = 2.7
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 562 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFNLPEDDKGSEASSEA 615
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein
protein.
Length = 1320
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 564 PDHQIPDSIHQPPQ-DLTSISINPPEPRTKRSSRRG*SLRCHXKLHQ--RXSPPSSXA 728
P H P S+ QPP+ L + +N EPR+ SSR G LR H L + + S SS A
Sbjct: 562 PPHSEPPSVEQPPKPKLEGVLVNHNEPRS--SSRIG--LRVHFDLPEDDKGSEASSEA 615
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,638,917
Number of Sequences: 237096
Number of extensions: 2338495
Number of successful extensions: 5679
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5668
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -