Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_O08
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.015
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.019
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 31 0.24
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.73
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.97
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXP-----PPPXXFLGXXPPPPP 331
PPPPPP P PPP +G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 35.9 bits (79), Expect = 0.006
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 416 PPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
PPP P PPPP PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 35.5 bits (78), Expect = 0.008
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
P PPP PPPP G PPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.9 bits (74), Expect = 0.026
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
PPP P PPPP PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect = 0.059
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
PPPPPP PPPP PPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPP--------PPPPP 783
Score = 32.3 bits (70), Expect = 0.078
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPP 336
G PPPPPP PPPP PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP-------PPPP 783
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
P PPP PPPP PPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.32
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPPPP PPPP PPPPP
Sbjct: 759 GGPPPPPPPPGV--AGAGPPPP-------PPPPP 783
Score = 29.9 bits (64), Expect = 0.42
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = -1
Query: 419 PPPPP------PXXKKKXXPPPPQXXFWXXPPPPPP 330
PPPPP P PPP PPPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.015
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPPXXXKKKKK 306
G PPPPPP + PP Q PPPPPP KK+K
Sbjct: 7 GNPPPPPPPPGFE-----PPSQ------PPPPPPPGYVKKRK 37
Score = 32.3 bits (70), Expect = 0.078
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPPXXXKKKKKK 304
G PPPPPP P PPPPP KK+K K
Sbjct: 7 GNPPPPPPPPGFEPPSQPP----------PPPPPGYVKKRKNK 39
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPP 370
PPPPPP KK+ P
Sbjct: 25 PPPPPPGYVKKRKNKTP 41
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPPPXXXKKKKKXXFFXXGGGGGXXXPPXXEXP 243
PPPPPP + + PP PPPPP G PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 33.1 bits (72), Expect = 0.045
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPP-PPXXFLGXXPPPPPXXXKKKKKKXXFFXGGGGGXXXPPXKXTP 244
PPPPPP + + PP PPPPP G PP + P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 32.7 bits (71), Expect = 0.059
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 501 PPPXXXXXXXXXXGGGGXXXXXXGXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPP 334
PPP G G PPPPPP P PP PPPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSN----SSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPP---XXFLGXXPPPPP 331
G PPPPPP PPP + P PPP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXX--PPPPQXXFWXXPPPPPPXXXKKKKKXXFFXXGGGGGXXXPP 258
G PPPPPP PPP PP PP + G PP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 257 XXEXP 243
P
Sbjct: 417 VPTPP 421
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 416 PPPPPXXKKKXXPPPPQXXFWXXPPPPPPXXXKKKKKXXFFXXGGGGG 273
PPPPP PPPP FW P P K F G G
Sbjct: 306 PPPPP-------PPPPSNDFWKDSNEPAPADNKGDMGAVFAEINKGEG 346
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 431 GXXXPPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
G PPPP + PPPP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 432 GXXXPPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
G PPPP + PPP G PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 0.97
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 260 GGXSXPPPPPXKKXXFFFFFFXXXGGGGGXXPKNXXGGGGXXFFFXXXGGGGGG 421
GG PPP P F F GG G + GGG F GG GGG
Sbjct: 195 GGSGGPPPGPGG-----FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPP 333
PP P P K PPPP P PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPPP-XXFLGXXPPPPP 331
PP P P K PPPP + PP P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPP 333
PPPPPP K PP P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -1
Query: 416 PPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
PPPPP PP PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
PPPPP PP P PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPP--PPPP 330
P PPPP PPP PP PPPP
Sbjct: 1705 PTPPPP--PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 419 PPPPPPXXKKKXXPPPPQXXFWXXPPPPPP 330
PPPPP PP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPPPXXFLGXXPPPPP 331
PP PPP PP P +G P PPP
Sbjct: 1189 PPVPPP-----SEAPPVPKPSVGVPPVPPP 1213
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 420 PPPPPPXXXKKKXXPPPP 367
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,642,672
Number of Sequences: 5004
Number of extensions: 31290
Number of successful extensions: 439
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -