Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_O02
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.034
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.077
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.31
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.72
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.7
SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal prote... 28 2.2
SPAC977.11 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.8
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 26 6.7
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 8.9
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 8.9
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 8.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.034
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 642 PPXPPXXPXGXXXP-PXPXXXPXPPXGXPPPXXPTXPXAAXGXXPXXXXP 788
PP PP P P P P P G PPP P A G P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXG 764
P P PP P PP P G PPP P +A G
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 613 PPXXPRXXPXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXP 741
P P P PP P G PP P GPPPP P
Sbjct: 742 PTPAPAPIPVPP-PAPIMGGPPPPPPPPGVAG--AGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 637 PXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXP 741
P PP P P P P+ G PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = +2
Query: 644 PPPPXXPXXAXXPPXSXXXSXPPX---GXPPPXSXHXXPXGXGXXPXXXPXXXXSLXPXX 814
PPPP P + PP G PPP G G P P S
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 815 CXTPXPR 835
P P+
Sbjct: 792 YYAPAPQ 798
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 615 PXXXPVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXG 764
P P+ PP P G PP P P PPP P P + G
Sbjct: 744 PAPAPIPVPPPAP--IMGGPPPPPPP---PGVAGAGPPPPPPPPPAVSAG 788
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 723 PPPXXPTXPXAAXGXXPXXXXPRXXLSXPXXVXXPXRAEGGXXXPPXPPGP 875
PPP P A P P + P P G PP PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.077
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXGXXPXXXXPRXXLSX 806
PV PP PP P PP P P P + G P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 807 PXXVXXPXRAEGGXXXPPXPP 869
P P + PP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPP 1212
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 615 PXXXPVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXGXXP 773
P P PP PP PP P P PP P P + G P
Sbjct: 1180 PVPKPAAGVPPVPPP----SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/94 (20%), Positives = 22/94 (23%)
Frame = +2
Query: 650 PPXXPXXAXXPPXSXXXSXPPXGXPPPXSXHXXPXGXGXXPXXXPXXXXSLXPXXCXTPX 829
PP PP PP P + G P P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 830 PRRRGAXXPPXAPRPXXXXXXXPXXXLXXXPSPS 931
+ PP P P L P P+
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/92 (22%), Positives = 22/92 (23%)
Frame = +1
Query: 616 PXXPRXXPXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXPXXPXRRXAXALXXSXXXX 795
P P PP P P P P+ P P P S
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 796 XSPPPXXXXXPPAPKGGXXSPXRPPAXXXKXP 891
PPP P P G P A P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXX-PPXPXXXPXPPXGXPPPXXPTXPXAAXGXXP 773
P PP P P PP P P P PPP P P + P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 27/107 (25%), Positives = 30/107 (28%), Gaps = 8/107 (7%)
Frame = +1
Query: 613 PPXXPRXXPXPPXPXXXXXGXXPPXXPXXXXX------PLXGPP--PPXXPXXPXRRXAX 768
P R PP P G P P P+ PP PP P
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Query: 769 ALXXSXXXXXSPPPXXXXXPPAPKGGXXSPXRPPAXXXKXPXXXXXP 909
+L PP PP P G +P PPA P P
Sbjct: 438 SLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = +3
Query: 612 APXXXPVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXP--PPXXPTXPXAAXGXXPXXXX 785
AP P P P P PP P P G P PP P P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Query: 786 P 788
P
Sbjct: 487 P 487
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/78 (25%), Positives = 26/78 (33%)
Frame = +1
Query: 637 PXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXPXXPXRRXAXALXXSXXXXXSPPPXX 816
P PP P PP L PPPP P A ++ +PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP-----PRSNAAGSIPLPPQGRSAPP--- 362
Query: 817 XXXPPAPKGGXXSPXRPP 870
PP P+ + +PP
Sbjct: 363 ---PPPPRSAPSTGRQPP 377
Score = 27.9 bits (59), Expect = 2.2
Identities = 29/120 (24%), Positives = 35/120 (29%), Gaps = 15/120 (12%)
Frame = +1
Query: 613 PPXXPRXXPXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXPXXPXRRX------AXAL 774
PP P PP G PP P + PP P P P R A
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPP--PLSSSRAVSNPPAPP-PAIPGRSAPALPPLGNAS 410
Query: 775 XXSXXXXXSPPPXXXXXPPA---------PKGGXXSPXRPPAXXXKXPXXXXXPRXXXVP 927
S +PP PP+ P G +P PP+ P P +P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 10/88 (11%)
Frame = +3
Query: 642 PPXPPXXPXG-------XXXPPXPXXXPXPPXG--XPPPXXPTXPXAAXGXXP-XXXXPR 791
PP PP P P P P P G PP P P A P +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 792 XXLSXPXXVXXPXRAEGGXXXPPXPPGP 875
L P PP PP P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +1
Query: 637 PXPPXPXXXXXGXXPPXXPXXXXXPLXGPPPPXXPXXPXRRXAXALXXSXXXXXSPPPXX 816
P PP PP P P+ P P P P A L PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSL--PMGAPAAPPLP--PSAPIAPPLPAGMPAAPPLPPAA 473
Query: 817 XXXPPAPKGGXXSP 858
PPAP +P
Sbjct: 474 PAPPPAPAPAPAAP 487
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXP 740
P P PP P PP P P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 612 APXXXPVXXXPPXPPXXPXGXXXPPXPXXXP-XPPXGXPPPXXPTXP 749
AP PP P P PP P P PP P P+ P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/87 (22%), Positives = 25/87 (28%), Gaps = 4/87 (4%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXP--PXGXPPPXXPTXPXAAXGXXPXXXXPR--X 794
P+ P P P P P P P P PP P P + P
Sbjct: 1451 PMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVA 1510
Query: 795 XLSXPXXVXXPXRAEGGXXXPPXPPGP 875
+ P P ++ P PP P
Sbjct: 1511 PATAPSSTLPPSQSSFAHVPSPAPPAP 1537
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +2
Query: 650 PPXXPXXAXXPPXSXXXSXPPX-GXPPPXSXHXXPXGXGXXP 772
PP P A P S PP PPP S P G P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXGXXPXXXXP 788
PV PP PP P P PP P P P P A P P
Sbjct: 1691 PVRPQSAAPPQMS-APTPPPPPMSVPPPPSAPPMPAGP--PSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +3
Query: 612 APXXXPVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXP 740
AP P P PP P PP P P P P
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.72
Identities = 19/83 (22%), Positives = 23/83 (27%)
Frame = +2
Query: 626 PGXXXXPPPPXXPXXAXXPPXSXXXSXPPXGXPPPXSXHXXPXGXGXXPXXXPXXXXSLX 805
P PPP P A P S P PPP P ++
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVS 220
Query: 806 PXXCXTPXPRRRGAXXPPXAPRP 874
P T P++ P P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/64 (26%), Positives = 20/64 (31%)
Frame = +1
Query: 679 PPXXPXXXXXPLXGPPPPXXPXXPXRRXAXALXXSXXXXXSPPPXXXXXPPAPKGGXXSP 858
PP PL PPPP P P + + + PP P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPP-PPATPSQP 282
Query: 859 XRPP 870
RPP
Sbjct: 283 PRPP 286
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/80 (27%), Positives = 23/80 (28%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXGXXPXXXXPRXXLSX 806
P PP P G PP P P PPP P P P +
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Query: 807 PXXVXXPXRAEGGXXXPPXP 866
P P E G PP P
Sbjct: 262 P-----PMHHEPGEHMPPPP 276
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/80 (27%), Positives = 23/80 (28%)
Frame = +3
Query: 627 PVXXXPPXPPXXPXGXXXPPXPXXXPXPPXGXPPPXXPTXPXAAXGXXPXXXXPRXXLSX 806
P PP P G PP P P PPP P P P +
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 313
Query: 807 PXXVXXPXRAEGGXXXPPXP 866
P P E G PP P
Sbjct: 314 P-----PMHHEPGEHMPPPP 328
>SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 414 GRRSSRTSGQRVVAAVLLARPLRVHVHFVLDVAL 313
G++ +T+GQ + V A P+ H H V+ V L
Sbjct: 128 GKQIGKTTGQWRIGKVAFAWPIPAHTHIVVRVLL 161
>SPAC977.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 414 GRRSSRTSGQRVVAAVLLARPLRVHVHFVLDVAL 313
G++ +T+GQ + V A P+ H H V+ V L
Sbjct: 128 GKQIGKTTGQWRIGKVAFAWPIPAHTHIVVRVLL 161
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 663 PXGXXXPPXPXXXPXPPXGXPPPXXP 740
P G PP P PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 681 PPXPXXXPXPPXGXPPPXXPTXP 749
PP P PP G PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 670 GXXPPXXPXXXXXPLXGPPPPXXPXXPXRR 759
G PP P P PPPP P +R
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 218 VESSPRPVEICTDVTRYNTRKVKRTTKSHV 307
++SSP P+E+ T + + VK K H+
Sbjct: 662 LKSSPSPIELTEQETEFVVKVVKHVFKDHL 691
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 200 RQPTSFVESSPRPVEICTDVTRYNTRKVKRTTKSHVYCK 316
RQP F PR EIC +T YN +V H K
Sbjct: 178 RQPLFF---QPRKTEICIAITMYNEDEVLFARTMHSVMK 213
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 680 PPXSXXXSXPPXGXPPPXSXHXXP 751
PP S S PP G PP S P
Sbjct: 49 PPPSVDHSAPPSGPPPSYSNSAAP 72
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 182 TDKGQHRQPTSFVESSPRPVEICTDVTRYNTR 277
T+ H+ T F+E P P + T +TR +TR
Sbjct: 54 TNVSSHQSATKFIEPEPSPTK-KTKLTRRDTR 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.139 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,094
Number of Sequences: 5004
Number of extensions: 51991
Number of successful extensions: 260
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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