Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_N18
         (1513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94832-1|AAB53222.1|  711|Homo sapiens KSRP protein.                   32   6.3  
U69126-1|AAC50892.1|  652|Homo sapiens FUSE binding protein 2 pr...    32   6.3  
BC085004-1|AAH85004.1|  710|Homo sapiens KHSRP protein protein.        32   6.3  
AB209662-1|BAD92899.1|  384|Homo sapiens KH-type splicing regula...    32   6.3  
AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin ...    31   8.3  

>U94832-1|AAB53222.1|  711|Homo sapiens KSRP protein.
          Length = 711

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = -1

Query: 211 PPPGXPXPXXXLXGPXNXXGFXEXXXXXXPGAXXXPXXRXMPQXXXXDHVAPXPPXXHXP 32
           P PG P P   + GP N   F +      P A   P  +  PQ     +    PP  H P
Sbjct: 504 PGPGGPGPAGPM-GPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 562


>U69126-1|AAC50892.1|  652|Homo sapiens FUSE binding protein 2
           protein.
          Length = 652

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = -1

Query: 211 PPPGXPXPXXXLXGPXNXXGFXEXXXXXXPGAXXXPXXRXMPQXXXXDHVAPXPPXXHXP 32
           P PG P P   + GP N   F +      P A   P  +  PQ     +    PP  H P
Sbjct: 446 PGPGGPGPAGPM-GPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 504


>BC085004-1|AAH85004.1|  710|Homo sapiens KHSRP protein protein.
          Length = 710

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = -1

Query: 211 PPPGXPXPXXXLXGPXNXXGFXEXXXXXXPGAXXXPXXRXMPQXXXXDHVAPXPPXXHXP 32
           P PG P P   + GP N   F +      P A   P  +  PQ     +    PP  H P
Sbjct: 504 PGPGGPGPAGPM-GPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 562


>AB209662-1|BAD92899.1|  384|Homo sapiens KH-type splicing
           regulatory protein (FUSE binding protein 2) variant
           protein.
          Length = 384

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = -1

Query: 211 PPPGXPXPXXXLXGPXNXXGFXEXXXXXXPGAXXXPXXRXMPQXXXXDHVAPXPPXXHXP 32
           P PG P P   + GP N   F +      P A   P  +  PQ     +    PP  H P
Sbjct: 322 PGPGGPGPAGPM-GPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP 380


>AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin and
           TIR domain containing protein-B protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = -2

Query: 141 GGXXXXXAPXXXPXXAXCPRXPXXTTXPPXPXXPTXXPXPPXNP 10
           GG     AP   P    CP+ P      P P  PT  P PP +P
Sbjct: 471 GGQVPLGAPPPFPTWPGCPQPP------PPPAFPTASPAPPQSP 508


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,175,183
Number of Sequences: 237096
Number of extensions: 757727
Number of successful extensions: 6880
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5740
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22471744940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)