Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_N14
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin pr... 32 3.1
AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein. 32 3.1
AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein. 32 3.1
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 31 4.0
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 31 4.0
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 31 4.0
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 31 4.0
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 31 4.0
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 31 4.0
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 31 4.0
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 31 4.0
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 31 7.1
BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alph... 31 7.1
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 31 7.1
AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha ... 31 7.1
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 31 7.1
AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha ... 31 7.1
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 31 7.1
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 31 7.1
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 31 7.1
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 30 9.3
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.3
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 30 9.3
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 30 9.3
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 30 9.3
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 30 9.3
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.3
M59227-1|AAB59383.1| 155|Homo sapiens alpha-1 type III collagen... 30 9.3
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 30 9.3
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 30 9.3
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 30 9.3
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 30 9.3
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 30 9.3
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 30 9.3
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 30 9.3
>U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin
protein.
Length = 1056
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 458 HRELECXCPSALCRXRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPP 279
HR+L C ALC + + G P L P A STS P T C + +PP
Sbjct: 187 HRDLAGHCYYALCSQDCQV-VRGVDSDCPSTTLPPAPATSPSISTSEPVTELGCPNAVPP 245
>AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein.
Length = 1081
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 458 HRELECXCPSALCRXRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPP 279
HR+L C ALC + + G P L P A STS P T C + +PP
Sbjct: 227 HRDLAGHCYYALCSQDCQV-VRGVDSDCPSTTLPPAPATSPSISTSEPVTELGCPNAVPP 285
>AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein.
Length = 1081
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 458 HRELECXCPSALCRXRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPP 279
HR+L C ALC + + G P L P A STS P T C + +PP
Sbjct: 227 HRDLAGHCYYALCSQDCQV-VRGVDSDCPSTTLPPAPATSPSISTSEPVTELGCPNAVPP 285
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 685 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 744
Query: 832 PPXXAXP 852
PP P
Sbjct: 745 PPGIPGP 751
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 374 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 433
Query: 832 PPXXAXP 852
PP P
Sbjct: 434 PPGIPGP 440
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXPPXPXXXXXXXXPX 831
G+K G G PG P G PG + +G P PP P
Sbjct: 766 GFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPG 825
Query: 832 PPXXAXP 852
PP P
Sbjct: 826 PPGIPGP 832
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 340 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 392
>BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alpha 1
protein.
Length = 678
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 97 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 149
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 340 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 392
>AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 97 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 149
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 340 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 392
>AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 97 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 149
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 395 HGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPPA 276
HG + SP W Q + + P + P P +CCS P A
Sbjct: 256 HGGRDCSPTCWEQGKCSGPAEQEKRGPSFPKECCSQGPTA 295
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 97 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 149
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 649 RGWKXRXGXWSSTGXPGXXAPGQX--PGXARXPGGRXGXXASGXPXVAXPPXP 801
+G K G S G PG PG PG A PG G P PP P
Sbjct: 340 KGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP 392
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -2
Query: 836 GGXGXXXXXXXXGXGGHATXGXPEAXXPXRPPGXRAXPGXCPGAXXPGXPVEDHXPXRXF 657
G G G AT G P PPG +A P PG PG P E P
Sbjct: 590 GHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPG-KAGPVGPPGLGFPGPPGERGHPGVPG 648
Query: 656 HP 651
HP
Sbjct: 649 HP 650
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4
chain protein.
Length = 1690
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -2
Query: 836 GGXGXXXXXXXXGXGGHATXGXPEAXXPXRPPGXRAXPGXCPGAXXPGXPVEDHXPXRXF 657
G G G AT G P PPG +A P PG PG P E P
Sbjct: 590 GHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPG-KAGPVGPPGLGFPGPPGERGHPGVPG 648
Query: 656 HP 651
HP
Sbjct: 649 HP 650
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 106
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXP 792
G + G S G PG P PG PG A G P V+ P
Sbjct: 729 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 775
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 collagen
protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXP 792
G + G S G PG P PG PG A G P V+ P
Sbjct: 876 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 922
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>M59227-1|AAB59383.1| 155|Homo sapiens alpha-1 type III collagen
protein.
Length = 155
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXP 792
G + G S G PG P PG PG A G P V+ P
Sbjct: 16 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 62
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXP 792
G + G S G PG P PG PG A G P V+ P
Sbjct: 876 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 922
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 415
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -2
Query: 836 GGXGXXXXXXXXGXGGHATXGXPEAXXPXRPPGXRAXPGXCPGAXXPGXPVEDHXPXRXF 657
G G G AT G P PPG +A P PG PG P E P
Sbjct: 590 GHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPG-KAGPVGPPGLGFPGPPGERGHPGVPG 648
Query: 656 HP 651
HP
Sbjct: 649 HP 650
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 652 GWKXRXGXWSSTGXPGXXAPGQXPGXARXPGGRXGXXASGXPXVAXP 792
G + G S G PG P PG PG A G P V+ P
Sbjct: 876 GARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGP 922
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,546,435
Number of Sequences: 237096
Number of extensions: 2418721
Number of successful extensions: 10960
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10687
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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