Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_N10
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.63 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.8  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +3

Query: 378 MKDWQDVVRNYEKEN-----LYLAEAAQMLVRNISY 470
           +K+W+D V NY +EN     + L EA   L   + Y
Sbjct: 275 VKEWRDFVDNYAEENKRDEIVLLTEAYSSLENTLKY 310


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   YWKLNVGSRLKLETADDCL 57
           Y +L V  R K+E A+DCL
Sbjct: 88  YTQLPVNPRDKIEGAEDCL 106


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   YWKLNVGSRLKLETADDCL 57
           Y +L V  R K+E A+DCL
Sbjct: 88  YTQLPVNPRDKIEGAEDCL 106


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 351 LFGRYGSQRMKDWQDVVRNYEKEN 422
           L+ R       +W DV RNY+ E+
Sbjct: 44  LYVRQADLSDAEWYDVGRNYDMES 67


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 351 LFGRYGSQRMKDWQDVVRNYEKEN 422
           L+ R       +W DV RNY+ E+
Sbjct: 44  LYVRQADLSDAEWYDVGRNYDMES 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,427
Number of Sequences: 438
Number of extensions: 3008
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)