Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_N02
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 34 0.13
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 32 0.70
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 31 1.2
09_02_0543 + 10427321-10428315,10428440-10429154 29 3.7
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.7
12_02_1174 - 26696869-26698191 29 4.9
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 4.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 4.9
04_03_0061 + 10527159-10527866 29 4.9
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 29 6.5
03_02_0765 + 11000724-11002496 29 6.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.5
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 6.5
01_01_0570 - 4231100-4232560 29 6.5
10_05_0072 + 8839223-8839720 28 8.6
08_01_0059 - 394001-394708 28 8.6
06_03_0790 - 24636805-24637770 28 8.6
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 28 8.6
02_04_0400 - 22608519-22608844,22609044-22609122 28 8.6
>07_01_0479 + 3606663-3607448
Length = 261
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 746 RPRXXGXXXPXXRXXAXPPPXXPXXPXXPPAPXXPRXXP 862
RP G P R PPP P P PP P P P
Sbjct: 221 RPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNP 259
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.9 bits (69), Expect = 0.70
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 797 PPPXXPXXPXXPPAPXXPRXXPXAP 871
PPP P P PP P PR P P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPP 378
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 716 GXQXXLAXXPRPRXXGXXXPXXRXXAXPPPXXPXXPXXPPAPXXPRXXPXAP 871
G Q A P+ P PPP P P PP P P AP
Sbjct: 338 GTQENNATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 791 AXPPPXXPXXPXXPPAPXXPRXXPXAP 871
A PPP P P PP P P P +P
Sbjct: 72 APPPPQTPPSPPPPPPPPPPPPPPLSP 98
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 743 PRPRXXGXXXPXXRXXAXPPPXXPXXPXXPPAPXXPRXXPXAP 871
P P P PPP P P PP P P+ P P
Sbjct: 18 PTPAPQATPPPAIPESGPPPPPAPDMPPPPPTP-APQSSPAPP 59
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 397 PPXAGXLPXXPPXXXESRLPAPSDKEXXXPPP 492
PP A +P PP PAP PPP
Sbjct: 37 PPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPP 68
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 257 HGGLGLTNXSMSQMQGQVDYDFGVGGRLPI 168
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 797 PPPXXPXXPXXPPAPXXPRXXPXAP 871
PPP P P PP P P P P
Sbjct: 1172 PPPLSPSLPPPPPPPPLPSGPPPQP 1196
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +2
Query: 743 PRPRXXGXXX-PXXRXXAXPPPXXPXXPXXPPAPXXPRXXPXAP 871
P PR G P A PP P P PP P R P P
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +2
Query: 743 PRPRXXGXXXPXXRXXAX---PPPXXPXXPXXPPAPXXPRXXPXAP 871
P PR P R PPP P P PP P PR P
Sbjct: 127 PPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKP 172
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 797 PPPXXPXXPXXPPAPXXPRXXPXAP 871
PPP P P PP P P P P
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPPPP 640
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 797 PPPXXPXXPXXPPAPXXPRXXPXAP 871
PPP P P PP P P P P
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPP 945
>04_03_0061 + 10527159-10527866
Length = 235
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 368 PPTSXSXXTQPXGXAPFPXXPTQSFVDPIH 279
PP + S QP G P P PT +F D ++
Sbjct: 7 PPLAASRQEQPAGDCPPPPRPTTAFDDTLY 36
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHAXIRESESTVRILXXLQMN 284
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>03_02_0765 + 11000724-11002496
Length = 590
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
GA G G GAGG G G GGG
Sbjct: 267 GAGGGLGGGAGAGGGGGLGGGTGGG 291
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
GA G G GAGG G G GGG
Sbjct: 317 GAGGGLGGGAGAGGGGGLGGGAGGG 341
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
GA G G GAGG G G GGG
Sbjct: 357 GAGGGLGGGAGAGGGGGLGGGAGGG 381
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
GA G G GAGG G G GGG
Sbjct: 437 GAGGGFGGGAGAGGGGGLGGGAGGG 461
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 665 GXAXXSRXXSXARXXXRGXQXXLAXXPRPRXXGXXXPXXRXXAXPPPXXPXXPXXPPAPX 844
G SR S A P+P P A PPP P PPA
Sbjct: 293 GRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKG 352
Query: 845 XPRXXP 862
P P
Sbjct: 353 PPPPPP 358
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 734 AXXPRPRXXGXXXPXXRXXAXPPPXXPXXPXXPPAPXXPRXXPXAP 871
A P P P PPP P PP P P P P
Sbjct: 324 AAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 797 PPPXXPXXPXXPPAPXXPRXXPXAP 871
PPP P P PP P PR P +P
Sbjct: 357 PPPPPPFAPTLPP-PPPPRRKPPSP 380
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
GA G G GAGG G G GGG
Sbjct: 167 GAGGGFGGGAGAGGGVGGGGRFGGG 191
>10_05_0072 + 8839223-8839720
Length = 165
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 397 PPXAGXLPXXPPXXXES-RLPAPSDKEXXXPPPXXXSXXFXDVL 525
PP AG P E + PAP++KE PP DV+
Sbjct: 87 PPAAGDAAAPKPAAEEPPKEPAPAEKEEGKPPSSSEGFGLDDVM 130
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Frame = +2
Query: 743 PRPRXXGXXXPXXRXXAXPPPXXPXXP----XXPPAPXXPRXXP 862
P P P R A PPP P P PPAP P P
Sbjct: 28 PSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSP 71
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
G G RG G GG G G GGG
Sbjct: 115 GGGGGGRGGGGGGGGGGGGGGGGGG 139
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 397 PPXAGXLPXXPPXXXESRLPAPSDKEXXXPPP 492
PP A PP E + P P ++E PPP
Sbjct: 175 PPPAPEPEPEPPKKEEPQPPPPKEEEKPEPPP 206
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 870 GAXGXXRGXXGAGGXXGXXGXXGGG 796
G G RG G GG G G GGG
Sbjct: 58 GGGGGGRGGGGGGGGGGGGGGGGGG 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,908,025
Number of Sequences: 37544
Number of extensions: 321532
Number of successful extensions: 2859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2411
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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