Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_M22
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 62 9e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 5e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 46 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 38 9e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 6e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 6e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 6e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.1 bits (154), Expect = 4e-13
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVLILADLQMNWIDKQLSWNAGEWG-CSTWLVSSERLWR 332
K+ VN L ++ N+ E + L+ W D QL W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTF 500
PD+VL N A G+Y +R + + NG V W+ ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 501 KFGSRMHNXDQMDFXIDQRIYXMXVSGXW 587
KFGS N DQ+ + + +S W
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYW 196
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V++NGS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V++NGS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V++NGS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Frame = +3
Query: 126 QRTIGSLPPYSKIVVNLTLHLRHANIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTW 305
+R +G+ + LTL ++ ++ E ++ L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 306 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPN 479
L + RLW+PDV++ N+A G Y V NNG+ ++ + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 480 DMQTCTFKFGSRMHNXDQMDFXIDQR----IYXMXVSGXWDV 593
D Q C KFGS ++ Q+D + I +G WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 414 VSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 539
V W + ++ +P D QTC KFGS ++ Q+D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V+++GS ++ M + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.9 bits (141), Expect = 1e-11
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 539
G VSW + ++ +P D Q+C KFGS +N Q+D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V+++GS ++ M + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 371
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V+++GS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V+++GS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVLILADLQMNWIDKQLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXI 548
G Y V+++GS ++ + + +P D Q C KFGS ++ +Q+D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 5e-11
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +W D +L W E+G L V S+ +WRPD+VL N A A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 414 VSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 539
V W + ++ +P D QTC KFGS ++ ++D
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.4 bits (135), Expect = 8e-11
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 162 IVVNLTLHLRHA---NIRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWL-VSSERLW 329
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 330 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKF 506
PD+VL N A G + +A + G V W + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 507 GSRMHNXDQMD 539
GS ++ Q+D
Sbjct: 164 GSWTYDGIQID 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 407
+ + W D LSW ++ G + V S+ +W PD+ + N+ T G V ++
Sbjct: 95 MTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSS 154
Query: 408 GSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFXIDQRIYXM 569
GSVS + + + +WP D C FGS +H+ ++++ +D++ + M
Sbjct: 155 GSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYY 137
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 539
+G V W S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVLILADLQMNWIDKQLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+L N A + V S+ G V W+ + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 513 RMHNXDQMD 539
++ Q++
Sbjct: 152 WTYDGYQLE 160
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 240 LQMNWIDKQLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 539
G V W + ++ +P D QTC KFGS ++ +D
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.8 bits (116), Expect = 2e-08
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 IRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 371
I E + T + + +W+D++L++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 372 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 243 QMNWIDKQLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 413
+ +W D +LS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 414 VSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Frame = +3
Query: 168 VNLTLHLRHANIRESESTVLILADLQMNWIDKQLSWNAGEW-GCSTWLVSSERLWRPDVV 344
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 345 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRM 518
+ + + ++ V N+G++ + + WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWS 181
Query: 519 HNXDQM 536
H +++
Sbjct: 182 HGSNEI 187
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +3
Query: 165 VVNLTLHLRH-ANIRESESTVLILADLQMNWIDKQLSWN--AGEWGCSTWLVSSERLWRP 335
+V + L +R A I + + + + W+D++L +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 336 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKF 506
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 507 GSRMHNXDQMDF 542
S D + F
Sbjct: 179 ASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 IRESESTVLILADLQMNWIDKQLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 380
I E I L W D++L+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 381 ALR---ARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 38.3 bits (85), Expect = 9e-05
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +3
Query: 252 WIDKQLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 416
W+D++L +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 417 SWIKRLDISXPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDF 542
+ R+ ++ M L +P D Q C+ + S D + F
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.5 bits (78), Expect = 6e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKQLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D +L++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.5 bits (78), Expect = 6e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKQLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D +L++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.5 bits (78), Expect = 6e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKQLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D +L++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 405 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQ 488
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMHNXDQMDFXID 551
C + S H D+M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.9 bits (74), Expect = 0.002
Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 324 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 494
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 495 TFKFGSRMHNXDQMDF 542
+ S H + F
Sbjct: 147 SMMIESLSHTTQDLVF 162
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.006
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 324 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 494
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 495 TFKFGSRMHNXDQMDFXIDQ 554
F S HN M DQ
Sbjct: 157 PLIFESWTHNVLDMVLYWDQ 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 111 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVLILADLQMNWIDKQLSW-NAG 284
STR +R + P + VN++ L L A+ ES + LQ W D +L + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 285 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISXPISM 458
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 459 QLDNWPNDMQTCTFKFGS 512
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 111 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVLILADLQMNWIDKQLSW-NAG 284
STR +R + P + VN++ L L A+ ES + LQ W D +L + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 285 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISXPISM 458
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 459 QLDNWPNDMQTCTFKFGS 512
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 111 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVLILADLQMNWIDKQLSW-NAG 284
STR +R + P + VN++ L L A+ ES + LQ W D +L + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 285 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISXPISM 458
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 459 QLDNWPNDMQTCTFKFGS 512
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.9 bits (59), Expect = 0.13
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +3
Query: 240 LQMNWIDKQLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 410
LQ W D +L + N ++ + + +W PD ++ R+ NG
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 223
Query: 411 SVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
+V+++ R + +L+ +P D C+F S
Sbjct: 224 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISXPISMQLDNWPND 482
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 483 MQTC 494
+Q C
Sbjct: 127 IQIC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 103 GQ*CCVFAFCRTSYSTSEEKPVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,153
Number of Sequences: 438
Number of extensions: 5306
Number of successful extensions: 89
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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