Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_M17
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 8e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 3e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 4e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 2.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRVQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 427
V L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 VSNNGSVSW 454
+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRVQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SWIKRLDISTPISMQXDNWGPTTXXN 526
+ TP+ W P N
Sbjct: 148 LCVP-FTTYTPVCEYDHTWWPYDILN 172
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 47.6 bits (108), Expect = 1e-07
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRVQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 457
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMQXDNW 505
RL I M +N+
Sbjct: 122 SRLTIKAGCPMNLENF 137
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.8 bits (106), Expect = 3e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRVQAD 271
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSW 454
V W
Sbjct: 137 VEW 139
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.8 bits (106), Expect = 3e-07
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 ESTVRVQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 418
T V ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 419 ---RARVSNNGSVSW 454
+A + + G V W
Sbjct: 121 IMTKAILHHTGKVVW 135
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 230 NIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWI 457
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRVQADLQMNWIDKR 298
+ D LL+ Y+R P LT+ L N++ T V ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 299 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 454
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 457
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RVQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 430
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGSVSWI 457
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.4 bits (100), Expect = 1e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRVQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 457
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRVQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + ++ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 454
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.5 bits (93), Expect = 1e-05
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRVQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + ++ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 454
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.9 bits (89), Expect = 3e-05
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRVQADLQMNWID 292
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 463
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMQXDNW 505
L I M+ N+
Sbjct: 156 LTIKAKCPMELRNF 169
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.7 bits (86), Expect = 7e-05
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRVQADLQMN 283
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 284 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 451
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 452 WIKRLDISTPISMQXDNW 505
+ + + +W
Sbjct: 159 CVPSVKHVAKCATDFSSW 176
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.3 bits (80), Expect = 4e-04
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRVQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + VQ + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 --LDISTPISMQ 493
L +S P++++
Sbjct: 154 ISLTLSCPMNLK 165
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.003
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRVQADLQMNWIDKR 298
++D++L YD P D VV + + +R + I + VQ + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 463
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 --LDISTPISMQ 493
L +S P++++
Sbjct: 154 ISLTLSCPMNLK 165
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 419 RARVSNNGSVSWIKRLDISTPISMQXDNWGPTTXXNXAXF 538
+ VSN+ + + L ST S DN+GP + A F
Sbjct: 570 QTEVSNSKKLDRLDSLRGSTTDSQTEDNFGPLSNVRFAVF 609
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.6
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRVQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 355
++V+ + + N I + RV ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNA 388
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 337 PSAAAPLPCVPTQS 296
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,734
Number of Sequences: 438
Number of extensions: 3772
Number of successful extensions: 56
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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