Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_M16
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 52 4e-07
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 51 9e-07
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 51 9e-07
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 51 9e-07
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 51 1e-06
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 51 1e-06
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 50 3e-06
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 50 3e-06
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 49 5e-06
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 48 7e-06
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 48 7e-06
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 48 7e-06
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 48 7e-06
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 48 7e-06
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 48 7e-06
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 48 7e-06
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 47 2e-05
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 45 8e-05
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 45 8e-05
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 44 1e-04
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 43 2e-04
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 43 3e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 42 4e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 42 4e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 42 4e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 42 6e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 41 0.001
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 41 0.001
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 41 0.001
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 41 0.001
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 41 0.001
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 41 0.001
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 40 0.002
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 40 0.002
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 40 0.002
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 40 0.002
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 40 0.002
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 40 0.002
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 40 0.002
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 39 0.005
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 39 0.005
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 39 0.005
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 38 0.007
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 38 0.007
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.009
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.009
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 38 0.012
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 38 0.012
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 38 0.012
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 37 0.016
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 37 0.016
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 37 0.016
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 37 0.021
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.050
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.050
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.050
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 36 0.050
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 36 0.050
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.065
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 34 0.11
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 34 0.15
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 34 0.15
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 34 0.15
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.15
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.26
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.26
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 33 0.26
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 32 0.46
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 32 0.46
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 30 1.9
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 30 1.9
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 30 2.5
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 30 2.5
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 30 2.5
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.7
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.5
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 28 7.5
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A recept... 28 9.9
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 443
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 443
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 443
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Frame = +3
Query: 72 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 236
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 237 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYA 410
+ L+M W DK+L+WN +WG ++ + S+++W PD+VL NA
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITIT 130
Query: 411 LRARVSNNGSVSW 449
A++ ++G V W
Sbjct: 131 SLAKIDHHGRVVW 143
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 52.4 bits (120), Expect = 4e-07
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Frame = +3
Query: 39 NVDDLYYSCYRFLLTCAIASAAECENAT-SLSLMIDSLLATYDRESPPDSKIVVNLTLHL 215
N+ + + + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 40 NMQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIEL 99
Query: 216 RHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLNAA 386
H I E +++L + W D LSW E+ G TWL +W PD+++ N
Sbjct: 100 VHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFNTL 158
Query: 387 ATTAGDYALRA--RVSNNGSVSW 449
A+R+ +VS G V++
Sbjct: 159 EHKMLLEAVRSPIKVSYTGEVTY 181
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +3
Query: 66 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 230
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 231 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-D 404
E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 405 YALRARVSNNGSVSW 449
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +3
Query: 66 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 230
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 231 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-D 404
E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 405 YALRARVSNNGSVSW 449
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +3
Query: 66 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 230
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 231 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG-D 404
E + + L+ WID++LSW+ + G + V E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 405 YALRARVSNNGSVSW 449
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLN 380
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLN 380
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 312 EWG--CSTWLVSSERLWRPDVVLLN 380
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 299
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 300 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 449
W+ E+G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 299
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 300 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 449
W+ E+G V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNG 437
L +NW+D RLSWN W + R+W+PD++L+N A A + V+++G
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDG 224
Query: 438 SVSW 449
+V+W
Sbjct: 225 NVTW 228
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 398
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 399 GDYALRARVSNNGSVSW 449
+ V ++G V+W
Sbjct: 159 VSFKSNVFVDHHGDVTW 175
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +3
Query: 75 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 239
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 240 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 413
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 414 RARVSNNGSVSW 449
V + G V W
Sbjct: 126 NMIVYSTGLVHW 137
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 398
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 399 GDYALRARVSNNGSVSW 449
+ V ++G V+W
Sbjct: 159 VSFKSNVFVDHHGDVTW 175
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +3
Query: 75 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 239
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 240 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 413
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 414 RARVSNNGSVSW 449
V + G V W
Sbjct: 126 NMIVYSTGLVHW 137
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +3
Query: 75 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 239
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 240 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 413
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 414 RARVSNNGSVSW 449
V + G V W
Sbjct: 126 NMIVYSTGLVHW 137
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +3
Query: 75 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 239
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 240 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT-AGDYAL 413
V + A L W D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 414 RARVSNNGSVSW 449
V + G V W
Sbjct: 126 NMIVYSTGLVHW 137
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTA 398
++ E + + + L +W+D RLSWN E+G T + E LW PD++L NA +
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 399 GDYALRARVSNNGSVSW 449
+ VS G V+W
Sbjct: 104 VSETTQVHVSFEGRVTW 120
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 159 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 335
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 336 VSSERLWRPDV 368
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/100 (21%), Positives = 45/100 (45%)
Frame = +3
Query: 96 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 275
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 276 NWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT 395
+W D +SW+ +WG S ++W P++V +N +T+
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTS 153
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 135 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 299
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 300 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 449
W + T L + LW PD++L N+ + Y + + G+++W
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINW 136
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 189 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 362
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 363 DVVLLNAAATTAGD-YALRARVSNNGSVSW 449
DV++ N+A YA V NG V+W
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNW 140
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 350
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 351 LWRPDVVLLNAAATTAGD--YALRARVSNNGSV 443
+W P+ +++ + D Y A + +NGS+
Sbjct: 138 VWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSI 170
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Frame = +3
Query: 51 LYYSCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLR 218
+ ++ +L+ I + C+ + + + + LL Y+ P + V + L L+
Sbjct: 1 MIFNLINSILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQ 60
Query: 219 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV---SSERLWRPDVVLLNAA 386
++ E V + A L W D +L W ++G + SS+ +W+PDV+L N+A
Sbjct: 61 QILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSA 120
Query: 387 A 389
A
Sbjct: 121 A 121
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Frame = +3
Query: 135 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLQMNWIDKRLS 299
++ L YD P D + VN+ L L + ++ E + ++ Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 300 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 443
W+ E+G T L + LW+PD++L N+A + + VS+NG V
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Frame = +3
Query: 51 LYYSCYRFL---LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTL 209
L Y C+ L L+ A T + + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSSHRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEIKF 61
Query: 210 HLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 383
L+ + E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 62 WLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNN 121
Query: 384 AATTA--GDYALRARVSNNGSV 443
A + A V N G V
Sbjct: 122 ANMNVEENEMETNAIVDNTGRV 143
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Frame = +3
Query: 51 LYYSCYRFL---LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTL 209
L Y C+ L L+ A T + + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSSHRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEIKF 61
Query: 210 HLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 383
L+ + E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 62 WLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNN 121
Query: 384 AATTA--GDYALRARVSNNGSV 443
A + A V N G V
Sbjct: 122 ANMNVEENEMETNAIVDNTGRV 143
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 344
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 345 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 449
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 344
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 345 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 449
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 344
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 345 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 449
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 195 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 371
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 372 LLNAA 386
L N+A
Sbjct: 114 LYNSA 118
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +3
Query: 138 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 296
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 297 SWNAGEWGCSTWLVS-SERLWRP 362
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 386
L+M W D RL W+ G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 174 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 350
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 351 LWRPDVVLLNA 383
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 195 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 371
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 372 LLNAAATTAGDY---ALRARVSNNGSVSWN 452
L N+A + L A V N G V W+
Sbjct: 114 LYNSARGNSWSLYLTGLPAIVYNTGKV-WS 142
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Frame = +3
Query: 225 NIRESESTVRILADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNAA 386
++ E + ILA + +W D +L+W+ +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 387 ATT-AGDYALRARVSNNGSVSWN 452
+ + Y+ R VS+NG V N
Sbjct: 119 SESFDSTYSSRFIVSSNGDVQQN 141
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 213 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 389
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 390 TTAGDYALR-ARVSNNGSVSW 449
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 213 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 389
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 390 TTAGDYALR-ARVSNNGSVSW 449
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.001
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Frame = +3
Query: 54 YYSCYRFLLTCAIASAAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHL 215
+Y+ + +L +IA CEN +L S +++ + YDR P ++VN+T+ L
Sbjct: 44 FYALFSHILFFSIA--LNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVL 101
Query: 216 RHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAA 389
++E++ + W D RLSW+ ++ G +V +W P + + N+
Sbjct: 102 GILIELKENQQLAAYVISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYNSLE 161
Query: 390 TTAGDYALRA--RVSNNGSVSWN 452
+ RA R+ +NG + N
Sbjct: 162 SKDMLTENRADVRLYHNGRIKIN 184
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +3
Query: 72 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 236
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 237 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAAT 392
+E T+ ++ + W D+ L WN ++ TWL E LW PD + + T
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +3
Query: 135 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 296
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 297 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVS 446
+WN ++G + V SE +W+PD+++ N A + ++ ++ + G +S
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKIS 139
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +3
Query: 135 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 296
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 297 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVS 446
+WN ++G + V SE +W+PD+++ N A + ++ ++ + G +S
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKIS 139
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Frame = +3
Query: 135 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 296
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 297 SWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVS 446
+WN ++G + V SE +W+PD+++ N A + ++ ++ + G +S
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKIS 123
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +3
Query: 189 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 356
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 357 RPDVVLLNAA-ATTAGDYALRARVSNNGSV 443
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 192 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 368
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 369 VLLNAAA--TTAGDYALRARV 425
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 192 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 368
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 369 VLLNAAA--TTAGDYALRARV 425
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 201 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 362
L +L+ ++E E V ++ +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +3
Query: 192 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 359
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 360 PDVVLLNAAATTAGDYALRARVSNNGSV 443
PD + N T ARV +G V
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRV 147
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +3
Query: 192 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 359
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 360 PDVVLLNAAATTAGDYALRARVSNNGSV 443
PD + N T ARV +G V
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRV 147
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +3
Query: 147 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWNAG 311
LL Y+ E P SK +N+T I + + +IL ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 312 EWGCSTWL-VSSERLWRPDVVLLNAA 386
+ T + + S+++W+PD++L N A
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYNNA 92
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 189 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 362
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 363 DVVLL-NAAATTAGDYALRARVSNNGSVSW 449
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 189 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 362
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 363 DVVLL-NAAATTAGDYALRARVSNNGSVSW 449
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 189 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 362
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 363 DVVLL-NAAATTAGDYALRARVSNNGSVSW 449
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Frame = +3
Query: 81 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 254
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 255 ILADLQMN--WIDKRLSWNAGEWGCSTWLVS--SERLWRPDVVLLNAAAT 392
+AD+ + W D RL + + L S SERLW P+V +N+ +T
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKST 128
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 90 IASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-LRHANIRESESTVRILA 263
+ + A E + + +L+ TYD + P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 264 DLQMNWIDKRLSWNAGEWGCST-WL-VSSERLWRPDVVLLN 380
+ + W D L WN W+ +S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 368
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 368
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 440
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 441 VSW 449
V+W
Sbjct: 137 VTW 139
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 249 VRILADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNAAATT-AGDYALR 416
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+A+ +
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 417 ARVSNNGSVSW 449
V N G V+W
Sbjct: 72 EVVYNTGEVNW 82
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 440
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 441 VSW 449
V+W
Sbjct: 137 VTW 139
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 201 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 362
L +L+ ++E V ++ +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 141 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 317
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 318 GCSTWLVSSERLWRPDVVLLNAA 386
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 141 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 317
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 318 GCSTWLVSSERLWRPDVVLLNAA 386
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +3
Query: 105 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 269
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 270 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLLNAAAT 392
+ W D+ L WN ++ TWL E LW PD + + T
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 186 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 362
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 363 DVVLLNA 383
D L N+
Sbjct: 138 DTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 186 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 362
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 363 DVVLLNA 383
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 186 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 362
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 363 DVVLLNA 383
D L N+
Sbjct: 138 DTYLYNS 144
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.050
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +3
Query: 135 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 299
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 300 WNAGEWGCSTWLVSSERL-WRPDVVLLNAAAT--TAGDYALRARVSNNGSVSWN 452
WN + T +V L W P + + N+ T D R+ + G V N
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYNSMDTKDMLTDDRYDVRIQHTGHVKVN 157
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 35.5 bits (78), Expect = 0.050
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD 404
+ E +++L +W D L W+ EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTL 127
Query: 405 YALRARVSNNGSV 443
RV NG V
Sbjct: 128 DNHNVRVHYNGKV 140
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.065
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 207 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 359
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 34.7 bits (76), Expect = 0.087
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 111 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 284
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 285 DKRLSWNAGEWGCSTWLVSS-ERLWRP 362
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 159 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWL 335
YD ++P + L L+ + E V ++ ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 336 VSSERLWRPDVVLLNA 383
+W P + A
Sbjct: 123 TRQSNVWSPTLSAFGA 138
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 33.9 bits (74), Expect = 0.15
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Frame = +3
Query: 105 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 278
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 279 -WIDKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLNAAATT 395
W D RLS+ C+T + VS +++W PD ++N+ +++
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINSKSSS 111
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 195 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 368
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 369 VLLNA 383
L N+
Sbjct: 193 YLYNS 197
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +3
Query: 72 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 221
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 222 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 383
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +3
Query: 72 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 221
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 222 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 383
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 183 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 356
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 357 RPDVVLLNA 383
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 183 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 356
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 357 RPDVVLLNA 383
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +3
Query: 51 LYYSCYRFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSKIVVNLTLH-LRHA 224
L S FL+ S + + L+ + TYD P D+ V +T +
Sbjct: 4 LLNSLLTFLVLRTFGSNTTNVESNTEVLLQELFNRTYDVNVKPSDTLTTVTITPNTFLLL 63
Query: 225 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCS-TWL-VSSERLWRPDVV 371
++ +++ T+ + + W D L WN + + W+ +S R+W PDV+
Sbjct: 64 SMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 159 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 335
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 336 VSSERLWRPDVVL 374
+ +++W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 347
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 348 RLWRPDVVLLN 380
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 347
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 348 RLWRPDVVLLN 380
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 228 IRESESTVRILADLQMNWIDKRLSWN-AGEWGC--STWLVSSERLWRPDVV 371
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 383
L M W D+RL+ N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 30.3 bits (65), Expect = 1.9
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Frame = +3
Query: 78 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 242
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 243 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDY 407
L+ +WIDKRLS+ G +++ + ++W PD N A T
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKP 167
Query: 408 ALRARVSNNGSVSWN 452
+ R+ N+G+V ++
Sbjct: 168 NVLIRIHNDGTVLYS 182
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +3
Query: 159 YDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGC 323
YD PP D + V + + ++ +N S + A ++M+WID RL +
Sbjct: 259 YDARQPPSLHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPIL 318
Query: 324 STWLVSSERLWRPDVVLLNAAATT 395
+ +WRPD + N+ +T
Sbjct: 319 VNDYTFLKMIWRPDPIFTNSKYST 342
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 30.3 bits (65), Expect = 1.9
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Frame = +3
Query: 78 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 242
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 243 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDY 407
L+ +WIDKRLS+ G +++ + ++W PD N A T
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKP 167
Query: 408 ALRARVSNNGSVSWN 452
+ R+ N+G+V ++
Sbjct: 168 NVLIRIHNDGTVLYS 182
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 183 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 356
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 357 RPDVVLLNA 383
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 183 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 356
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 357 RPDVVLLNA 383
PD L N+
Sbjct: 65 LPDTTLYNS 73
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 42 VDDLYYSCYRFLLTCAIASAAECENATSLS 131
+D YY CYR C I+ A C+N+T L+
Sbjct: 124 LDGGYYRCYRSHEFCLISDAILCKNSTILN 153
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 183 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 356
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 357 RPDVVLLNA 383
PD L N+
Sbjct: 107 LPDTTLYNS 115
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 201 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 362
L L+ + E + V ++ ++ W D RL+WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +3
Query: 141 DSLLATYDRESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEW 317
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 318 GCST---------WLVSSERLWRPDVVLLN 380
T WL ++W+P + + N
Sbjct: 99 SGFTRTRLEFVDFWLY---QIWKPRIYMTN 125
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 656 PXXRXXGGTPRGXXSXXXXXKPPP-GQPPXXGXPRXRXGGXXLLSRXXXXPPP 811
P GG+P + PPP G PP P + GG + PPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 719 PPPGQPPXXGXPRXRXGGXXLLSRXXXXPPPXNPXPRGS 835
PPP PP P GG R PPP P PRGS
Sbjct: 272 PPP--PPTGSPPPPPAGGSPPPPRAGSPPPP--PPPRGS 306
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 656 PXXRXXGGTPRGXXSXXXXXKPPP-GQPPXXGXPRXRXGGXXLLSRXXXXPPP 811
P GG+P + PPP G PP P + GG + PPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 719 PPPGQPPXXGXPRXRXGGXXLLSRXXXXPPPXNPXPRGS 835
PPP PP P GG R PPP P PRGS
Sbjct: 293 PPP--PPTGSPPPPPAGGSPPPPRAGSPPPP--PPPRGS 327
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 656 PXXRXXGGTPRGXXSXXXXXKPPP-GQPPXXGXPRXRXGGXXLLSRXXXXPPP 811
P GG+P + PPP G PP P + GG + PPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 719 PPPGQPPXXGXPRXRXGGXXLLSRXXXXPPPXNPXPRGS 835
PPP PP P GG R PPP P PRGS
Sbjct: 278 PPP--PPTGSPPPPPAGGSPPPPRAGSPPPP--PPPRGS 312
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 384 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 226
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 116 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 169
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 384 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 226
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 280 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 333
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/73 (26%), Positives = 24/73 (32%)
Frame = +2
Query: 629 TDLSRXGXEPXXRXXGGTPRGXXSXXXXXKPPPGQPPXXGXPRXRXGGXXLLSRXXXXPP 808
T + + G P + G P G S PP Q G P + PP
Sbjct: 280 TPVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPP 339
Query: 809 PXNPXPRGSXVXP 847
P P+GS P
Sbjct: 340 QGGP-PQGSFGAP 351
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 384 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 226
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 200 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 253
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +3
Query: 120 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 287
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 288 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLN 380
+RL W + E +S S+ +W PD L N
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLAN 144
>AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A receptor
subunit protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +3
Query: 120 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 287
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 288 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLN 380
+RL W + E +S S+ +W PD L N
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLAN 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,525,964
Number of Sequences: 27780
Number of extensions: 396717
Number of successful extensions: 1214
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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