Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_M13
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 39 0.006
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 39 0.006
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 39 0.006
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 38 0.013
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.030
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.052
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.052
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.052
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.052
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 35 0.069
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.069
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.069
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.069
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 35 0.069
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.16
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.16
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.21
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.21
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.21
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.37
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.37
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.37
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.49
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.49
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 31 1.1
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 1.5
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 31 1.5
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.4
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 29 3.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.4
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.4
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 29 3.4
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.4
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 29 3.4
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 29 3.4
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.4
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.5
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 4.5
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 29 4.5
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 4.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 4.5
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 6.0
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 29 6.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.0
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 6.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.9
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +3
Query: 108 FWLPFLLTCAIASAAEC-ENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA 272
FWL LL S + E + D L+ Y+R + P+ + + L L L
Sbjct: 4 FWLFLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQI 63
Query: 273 -NIRESESTVRIQADLQMNWIDKRLSW---NAGGVGLQHL 380
++ E + + L+ WID++LSW N GGV + ++
Sbjct: 64 IDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +3
Query: 108 FWLPFLLTCAIASAAEC-ENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA 272
FWL LL S + E + D L+ Y+R + P+ + + L L L
Sbjct: 4 FWLFLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQI 63
Query: 273 -NIRESESTVRIQADLQMNWIDKRLSW---NAGGVGLQHL 380
++ E + + L+ WID++LSW N GGV + ++
Sbjct: 64 IDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +3
Query: 108 FWLPFLLTCAIASAAEC-ENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA 272
FWL LL S + E + D L+ Y+R + P+ + + L L L
Sbjct: 4 FWLFLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQI 63
Query: 273 -NIRESESTVRIQADLQMNWIDKRLSW---NAGGVGLQHL 380
++ E + + L+ WID++LSW N GGV + ++
Sbjct: 64 IDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 78 VVIKCRRLILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLT 254
++I C L++ W+ LT + A E + + +L+ TYD D P D +V +T
Sbjct: 1 MLISCLLLLMLWILRFLT----AVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTIT 56
Query: 255 LH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQH 377
+ ++ +++ T++ + + W D L WN V ++
Sbjct: 57 PNTFILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYEN 98
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.030
Identities = 27/79 (34%), Positives = 27/79 (34%)
Frame = -3
Query: 893 GXGWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXG 714
G GWG R G G G G G GG G G GG R G
Sbjct: 61 GSGWGGGRGGG-----WGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Query: 713 DPGPXGGXLXRAGXRGGGG 657
G GG G RGGGG
Sbjct: 116 --GGGGGRGGGGGGRGGGG 132
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/77 (27%), Positives = 24/77 (31%)
Frame = +2
Query: 662 PXPAXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPX 841
P P P + P P G P P V S H+P P + P D
Sbjct: 104 PPSPGPVNPSEDPQ-PSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQP 162
Query: 842 PXXPXPXPSXXXPPIPG 892
P P PP PG
Sbjct: 163 SVEPSEDPQPSGPPSPG 179
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/84 (27%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Frame = +2
Query: 662 PXPAXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDX-- 835
P P+ +P G P G P P V S +P P + P D
Sbjct: 133 PQPSVEPSEDHQPSGPPSP---GPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQP 189
Query: 836 -----PXPXXPXPXPSXXXPPIPG 892
P P P PS PP PG
Sbjct: 190 SGSSSPGPVDPSDEPSPSGPPSPG 213
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +2
Query: 671 AXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPXX 850
A P P P +TG P P + P + P P P + P P
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 851 PXPXPSXXXPPIPG 892
P P PP PG
Sbjct: 765 PGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +2
Query: 671 AXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPXX 850
A P P P +TG P P + P + P P P + P P
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 851 PXPXPSXXXPPIPG 892
P P PP PG
Sbjct: 765 PGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +2
Query: 671 AXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPXX 850
A P P P +TG P P + P + P P P + P P
Sbjct: 288 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 851 PXPXPSXXXPPIPG 892
P P PP PG
Sbjct: 348 PGGCPPPPPPPPPG 361
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 207 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 356
YD D+P + L +L+ + E E V + +L W D RLSWNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 353
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 207 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 356
YD ++P + L +L+ ++E + + + ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = -3
Query: 887 GWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDP 708
G+G G G G G G GG G G G GG G
Sbjct: 93 GYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGY 152
Query: 707 GPXGGXLXRAGXRGGGG 657
G GG G GGGG
Sbjct: 153 GGGGGGGGDFGGYGGGG 169
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = -3
Query: 893 GXGWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXG 714
G G+G G G G G G GG G G G G
Sbjct: 172 GGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGG 231
Query: 713 DPGPXGGXLXRAGXRGGGGXXP 648
GP GG G GGGG P
Sbjct: 232 GYGPGGG--YGMGGGGGGGGCP 251
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = -3
Query: 887 GWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDP 708
G+G G G G G G GG G G GG G
Sbjct: 164 GYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGY 223
Query: 707 GPXGGXLXRAGXRGGGGXXPRXARXGXXXGXXR 609
GP GG G GG G G G R
Sbjct: 224 GPSGGYGGGYGPGGGYGMGGGGGGGGCPNGECR 256
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.21
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 240 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 353
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.21
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 240 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 353
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 183 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 347
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 348 W 350
W
Sbjct: 85 W 85
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +1
Query: 676 PARXRXPPXGPGSPX---AXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPX 846
P + P G GSP A PP SP P PP A P R P P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Query: 847 XTXXXPXXRXXPHP 888
P P P
Sbjct: 302 PPRGSPPTGSLPPP 315
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/85 (24%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +2
Query: 644 AXAXTXPXPAXPXXPXDRPVGXDXPXLTGTAXPXP-XXHPVVPXSXAHRPXXPXAXXPXX 820
A + + P P P G P TG+ P P P P + + P P P
Sbjct: 250 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 309
Query: 821 AXXDXPXPXXPXPXPSXXXPPIPGR 895
P P PP P R
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +1
Query: 676 PARXRXPPXGPGSPX---AXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPX 846
P + P G GSP A PP SP P PP A P R P P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Query: 847 XTXXXPXXRXXPHP 888
P P P
Sbjct: 323 PPRGSPPTGSLPPP 336
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/85 (24%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +2
Query: 644 AXAXTXPXPAXPXXPXDRPVGXDXPXLTGTAXPXP-XXHPVVPXSXAHRPXXPXAXXPXX 820
A + + P P P G P TG+ P P P P + + P P P
Sbjct: 271 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 330
Query: 821 AXXDXPXPXXPXPXPSXXXPPIPGR 895
P P PP P R
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +1
Query: 676 PARXRXPPXGPGSPX---AXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPX 846
P + P G GSP A PP SP P PP A P R P P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Query: 847 XTXXXPXXRXXPHP 888
P P P
Sbjct: 308 PPRGSPPTGSLPPP 321
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/85 (24%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +2
Query: 644 AXAXTXPXPAXPXXPXDRPVGXDXPXLTGTAXPXP-XXHPVVPXSXAHRPXXPXAXXPXX 820
A + + P P P G P TG+ P P P P + + P P P
Sbjct: 256 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 315
Query: 821 AXXDXPXPXXPXPXPSXXXPPIPGR 895
P P PP P R
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPR 340
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 249 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 356
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHLAG 386
++ E + + ++ L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Frame = +3
Query: 120 FLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRE 284
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 285 SESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 380
+ L+M W DK+L+WN GGV H+
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHI 105
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 207 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 356
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +3
Query: 147 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 305
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 306 QADLQMNWIDKRLSWN 353
W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/107 (27%), Positives = 34/107 (31%)
Frame = -3
Query: 887 GWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDP 708
GWG + G G G G G GG G G GG +
Sbjct: 169 GWGGSQDGGSQGGWGGQNGGG--QGGNQGGGGGRGGNQGGEQGGWGGQGGSQ---GGSQG 223
Query: 707 GPXGGXLXRAGXRGGGGXXPRXARXGXXXGXXRXGXXRGAXRXXRLG 567
G GG + G +GGG + G G R G G R R G
Sbjct: 224 GSQGGWGNQGGQQGGGRGGQQG--PGGWGGGGRGGGWGGWGRGSRWG 268
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 785 GGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGG 657
G +G G G G R R G PGP G +G +GG G
Sbjct: 209 GDPGFDGKPGNPGNNGVRVRRIPGPPGPRGAE-GDSGVQGGPG 250
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 222 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV-GLQHL 380
PP +I + L++ ++ + E E D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +3
Query: 108 FWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA- 272
F F L + + E + T + D L+ YD P + +++N++++
Sbjct: 6 FKFVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVL 65
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWN 353
+ +E T+ ++ + W D+ L WN
Sbjct: 66 TLDPAEETINFSSEFILQWKDEFLFWN 92
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 159 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 332
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 333 DKRLSWN 353
D RL WN
Sbjct: 93 DDRLMWN 99
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/86 (27%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = -1
Query: 898 GAAXDGGXXAGXGGXRXXXGGXVXXCGXWXXXXXPXRPVGXGXRDXXVXXGXGGXGAGXR 719
G GG G GG GG CG P G G G GG G G
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGG--GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 718 XXI-XAHXAVXWXXRXCGXGXGXGXG 644
CG G G G G
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGG 108
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 676 PARXRXPPXGPGSPXAXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXP 834
PAR R P SP A R R P P PPA P P
Sbjct: 372 PARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAP 424
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = -3
Query: 785 GGXXXEGXXGXXGXGGXRCRXAXGDPGPXG--GXLXRAGXRGGGGXXPRXARXGXXXGXX 612
G +G G G G R + G PGP G G + R G G G P G
Sbjct: 198 GANGHDGATGQPGRSGTR---SYGSPGPAGSPGRVGRGGPPGPDGGYPMSGEPGSSGPQG 254
Query: 611 RXGXXRG 591
+ G G
Sbjct: 255 KAGQPGG 261
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 392 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 213
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 212 IVRCEERVD 186
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 392 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 213
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 212 IVRCEERVD 186
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 249 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 353
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/76 (26%), Positives = 21/76 (27%)
Frame = +2
Query: 668 PAXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPX 847
P P P R G P + G P P P P P P P
Sbjct: 297 PPPPPPPPGRTPGP--PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Query: 848 XPXPXPSXXXPPIPGR 895
P P PP P R
Sbjct: 355 YPSAGPGMYPPPPPSR 370
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 123 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 287
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 288 ESTVRIQADLQMNWIDKRLSWNAGGVG 368
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 6/91 (6%)
Frame = +3
Query: 645 PXPXPXPXPXXRXXQXTAXWAXIXXRX---PAPXP-PXPXXTXXSLXPXPTGRSGXXXXX 812
P P P P P A PAP P P P + P P
Sbjct: 65 PAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPA 124
Query: 813 XXPHXXTXPPXXX--RXPPXPAXXPPSXAAP 899
P+ PP PP P PP AP
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/76 (26%), Positives = 21/76 (27%)
Frame = +2
Query: 668 PAXPXXPXDRPVGXDXPXLTGTAXPXPXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPX 847
P P P R G P + G P P P P P P P
Sbjct: 307 PPPPPPPPGRTPGP--PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Query: 848 XPXPXPSXXXPPIPGR 895
P P PP P R
Sbjct: 365 YPSAGPGMYPPPPPSR 380
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -3
Query: 758 GXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGXXPRXARXGXXXGXXRXGXXRGAXR 582
G G G R G GP GG G RGG G R G G G RG R
Sbjct: 293 GERGGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGG--GGRGGFDGGRGGGGGFRGGDR 349
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGX 654
G G G GG +G G G GG + + G GP G G G GG
Sbjct: 265 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQG----GGGGGWGGQ 320
Query: 653 XPRXARXGXXXGXXRXGXXRGAXR 582
+ G G + +G R
Sbjct: 321 GQQQGGWGGQSGAQQWAHAQGGNR 344
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 123 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 287
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 288 ESTVRIQADLQMNWIDKRLSWNAGGVG 368
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +1
Query: 697 PXGPGSPXAXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPXXTXXXPXXRX 876
P GP P P P P PS P P P P+ P P
Sbjct: 979 PSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPS 1038
Query: 877 XPHPXP 894
P P
Sbjct: 1039 PNGPSP 1044
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGX 654
G G G GG +G G G GG + + G GP G G G GG
Sbjct: 228 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQG----GGGGGWGGQ 283
Query: 653 XPRXARXGXXXGXXRXGXXRGAXR 582
+ G G + +G R
Sbjct: 284 GQQQGGWGGQSGAQQWAHAQGGNR 307
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGX 654
G G G GG +G G G GG + + G GP G G G GG
Sbjct: 227 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQG----GGGGGWGGQ 282
Query: 653 XPRXARXGXXXGXXRXGXXRGAXR 582
+ G G + +G R
Sbjct: 283 GQQQGGWGGQSGAQQWAHAQGGNR 306
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGX 654
G G G GG +G G G GG + + G GP G G G GG
Sbjct: 266 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQG----GGGGGWGGQ 321
Query: 653 XPRXARXGXXXGXXRXGXXRGAXR 582
+ G G + +G R
Sbjct: 322 GQQQGGWGGQSGAQQWAHAQGGNR 345
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGGX 654
G G G GG +G G G GG + + G GP G G G GG
Sbjct: 265 GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQG----GGGGGWGGQ 320
Query: 653 XPRXARXGXXXGXXRXGXXRGAXR 582
+ G G + +G R
Sbjct: 321 GQQQGGWGGQSGAQQWAHAQGGNR 344
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 123 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 287
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 288 ESTVRIQADLQMNWIDKRLSWNAGGVG 368
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 123 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 287
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 288 ESTVRIQADLQMNWIDKRLSWNAGGVG 368
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 392 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 213
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 212 IVRCEERVD 186
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 243 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNA 356
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/78 (25%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +1
Query: 670 RXPARXRXPPXGPGSPXAXRHRXP---PXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSX 840
R P R PP +P A P P P P P P P PS
Sbjct: 313 RAPPATRAPPATTRAPPATTRPAPASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSY 372
Query: 841 PXXTXXXPXXRXXPHPXP 894
P + P +P P
Sbjct: 373 PSPSYPSPSYPSPSYPSP 390
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -3
Query: 785 GGXXXEGXXGXXGXGGXRCRXAXGDPGPXG--GXLXRAGXRGGGGXXPRXARXG 630
GG +G G G G + G PGP G G AG G G + G
Sbjct: 184 GGAGNQGAAGKPGLPGKNGQRGSGHPGPTGPVGETGNAGNNGHPGVDGENGKPG 237
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 153 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 326
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 327 -WIDKRLSW 350
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 785 GGXXXEGXXGXXGXGGXRCRXAXGDPGPXG 696
GG E G G GG C G PGP G
Sbjct: 118 GGFNEEVPVGGGGGGGACCSCGVGPPGPSG 147
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +3
Query: 144 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 323
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 324 NWIDKRLSWNAGGVGLQHL 380
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 222 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 353
PP +++ + + + L+ ++ E E V D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +1
Query: 694 PPXGPGSPXAXRH---RXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPXXTXXXP 864
PP PG R + PP P P SI PP P P P
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN 571
Query: 865 XXRXXPHPXP 894
P P P
Sbjct: 572 LSGAPPPPPP 581
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 746 PXXHPVVPXSXAHRPXXPXAXXPXXAXXDXPXPXXPXPXPSXXXPP 883
P + + P S A +P P A P A P P P P P+ P
Sbjct: 58 PVSYAIPPPSYA-QPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAP 102
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 126 LTCAIASAAECENATSLSLMIDSLLATYD-RDSPPDSK---IVVNLTLHLRH-ANIRESE 290
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 291 STVRIQADLQMNWIDKRLSWNAGGVG 368
Q L+ +WIDKRLS+ G G
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDG 133
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 694 PPXGPGS-PXAXRHRXPPXPXSPXXPSIXCPPAXXAXXXXPXXRTPXPSXPXXTXXXPXX 870
P P + P H PP P P+ PP P + P PS P
Sbjct: 107 PSFSPATQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAA-PSIQPPIPSALASARPAPFP 165
Query: 871 RXXPHPXP 894
P P P
Sbjct: 166 AAQPPPAP 173
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 126 LTCAIASAAECENATSLSLMIDSLLATYD-RDSPPDSK---IVVNLTLHLRH-ANIRESE 290
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 291 STVRIQADLQMNWIDKRLSWNAGGVG 368
Q L+ +WIDKRLS+ G G
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDG 133
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = -3
Query: 893 GXGWGXXRXXGXXXVXXGXXGXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXG 714
G WG G G G G G GG + G GG
Sbjct: 65 GGDWGGNNGGGGNW---GGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNN 121
Query: 713 DPGPXGGXLXRAGXRGGGG 657
D G G G RGGGG
Sbjct: 122 DGGWGGNNGGGGGGRGGGG 140
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN 353
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGG 657
G G G A AG G G G G + + G PGP G G GG G
Sbjct: 160 GEGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAP-GPQGPAGGPG 217
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 833 GXGVRXXGXXXXAXXAGGXXXEGXXGXXGXGGXRCRXAXGDPGPXGGXLXRAGXRGGGG 657
G G G A AG G G G G + + G PGP G G GG G
Sbjct: 160 GGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPSGAP-GPQGPAGGPG 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,839
Number of Sequences: 27780
Number of extensions: 304740
Number of successful extensions: 1627
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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