Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_M03
(835 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 103 2e-22
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 30 4.5
AF440568-1|AAL30170.1| 1670|Drosophila melanogaster antisocial i... 29 5.9
AF411457-1|AAL32442.1| 1900|Drosophila melanogaster rolling pebb... 29 5.9
AF386648-1|AAL50558.1| 1670|Drosophila melanogaster rolling pebb... 29 5.9
AF386647-1|AAL50557.1| 1900|Drosophila melanogaster rolling pebb... 29 5.9
AE014296-2086|AAN12251.1| 1670|Drosophila melanogaster CG32096-P... 29 5.9
AE014296-2085|AAF49970.2| 1670|Drosophila melanogaster CG32096-P... 29 5.9
AE014296-2082|AAF49967.2| 1900|Drosophila melanogaster CG32096-P... 29 5.9
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 103 bits (248), Expect = 2e-22
Identities = 55/162 (33%), Positives = 82/162 (50%)
Frame = +1
Query: 103 CRAGCKVRETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENKWTVELEPRLRTSVGLR 282
CRAGC ETT HI+Q+C+R+HG R+ RHN +V+ + + +EE V +EP L+ GL
Sbjct: 881 CRAGCDAPETTNHIMQKCYRSHGRRVARHNCVVNRIKRGLEERGCVVIVEPSLQCESGLN 940
Query: 283 KPDIIASRXXXXXXXXXXXXXXXRSLDELHREKRNKYGNHXXXXXXXXXXXXXPKAECVR 462
KPD++A R S+D+ H+ K N+Y A +
Sbjct: 941 KPDLVALRQNHIDVIDTQIVTDGHSMDDAHQRKINRYDR---PDIRTELRRRFEAAGDIE 997
Query: 463 ATSCTISWRGVWSLTSYKELRSIIGLREPTLQIVPILALRGS 588
S T++WRG+WS S K L + L + I+ + +RGS
Sbjct: 998 FHSATLNWRGIWSGQSVKRLIAKGLLSKYDSHIISVQVMRGS 1039
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 124 RETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENK 234
++ TA + Q HRT IL H+K+ ++ +A E K
Sbjct: 1336 KDLTAEMSSQVHRTAMEHILEHHKLGKYMVQASTEEK 1372
>AF440568-1|AAL30170.1| 1670|Drosophila melanogaster antisocial
isoform 2 protein.
Length = 1670
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 344 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 373
>AF411457-1|AAL32442.1| 1900|Drosophila melanogaster rolling pebbles
isoform 7 protein.
Length = 1900
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 574 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 603
>AF386648-1|AAL50558.1| 1670|Drosophila melanogaster rolling pebbles
isoform 6 protein.
Length = 1670
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 344 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 373
>AF386647-1|AAL50557.1| 1900|Drosophila melanogaster rolling pebbles
isoform 7 protein.
Length = 1900
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 574 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 603
>AE014296-2086|AAN12251.1| 1670|Drosophila melanogaster CG32096-PE,
isoform E protein.
Length = 1670
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 344 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 373
>AE014296-2085|AAF49970.2| 1670|Drosophila melanogaster CG32096-PC,
isoform C protein.
Length = 1670
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 344 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 373
>AE014296-2082|AAF49967.2| 1900|Drosophila melanogaster CG32096-PB,
isoform B protein.
Length = 1900
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 351 LARDHLHVHDHSDTIPGGDNIRLTETNRCS 262
L+ DH H H H D P G T+ CS
Sbjct: 574 LSGDHTHQHHHRDNQPEGKESNALNTSTCS 603
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,619,909
Number of Sequences: 53049
Number of extensions: 884868
Number of successful extensions: 2482
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2471
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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