Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L23
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    31   1.4  
03_02_0850 + 11775232-11776077,11776761-11777321                       31   1.4  
12_02_0305 - 17235832-17236379,17237345-17237444                       29   5.8  
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420     29   5.8  
03_05_0903 - 28652447-28653346,28653890-28654056,28654075-286542...    29   5.8  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   7.6  

>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -3

Query: 728 PXXRPXXXPXGXAGTPPPXXXGXGPPXPXXPXXXG 624
           P   P   P      PPP   G GPP P  P   G
Sbjct: 587 PEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPG 621


>03_02_0850 + 11775232-11776077,11776761-11777321
          Length = 468

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 625 PXXSGXXGXGGPXPXXXGGGVPAXPXG 705
           P   G  G GG  P   GGGVP  P G
Sbjct: 90  PQGGGGGGGGGVWPDVRGGGVPEYPGG 116


>12_02_0305 - 17235832-17236379,17237345-17237444
          Length = 215

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = +3

Query: 654 RAXPXGXRGGGPXXSXGXXPGPXXGXGPPXLXXFSXAXXXAPXXPPPXS 800
           RA P   R   P  S    P P     PP +   S     AP  PP  S
Sbjct: 80  RAPPSPRRASPPSVSVEPTPAPVIAPSPPPVVAPSQPPTIAPTQPPTPS 128


>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
          Length = 433

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 645 RXGRAXPXGXRGGGPXXSXGXXPGPXXGXGP 737
           R G   P G  GGGP    G  P    G GP
Sbjct: 10  RSGGGNPRGGGGGGPRGCGGGGPRSGGGGGP 40


>03_05_0903 -
           28652447-28653346,28653890-28654056,28654075-28654264,
           28654916-28655210,28655514-28655760,28656017-28656443
          Length = 741

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 727 PXXGPGXXPXDXXGPPPRXPXGXAR 653
           P  G    P D   PPPR P G AR
Sbjct: 41  PEAGAAVAPADPETPPPREPVGGAR 65


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
 Frame = +1

Query: 625  PXXSGXXGXGGPXPXXXGGGVPAXPXGXXXGRXXG-XAPRXFXPFPXPXXXPRGXPP 792
            P  +G  G G P P   GG  P  P     G   G   P      P P   P G PP
Sbjct: 1164 PPPAGFRG-GTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,768,640
Number of Sequences: 37544
Number of extensions: 298606
Number of successful extensions: 725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)