Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_L23
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.69
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.69
DQ173561-1|ABA00478.2| 64|Homo sapiens SHANK3 protein. 34 0.69
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.69
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 4.9
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 4.9
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 4.9
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 4.9
BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene fami... 30 8.6
AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein. 30 8.6
AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein. 30 8.6
AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein. 30 8.6
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.69
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGX-KXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GG R G+G + GA P P G G PPP G PP P
Sbjct: 190 GGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.69
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGX-KXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GG R G+G + GA P P G G PPP G PP P
Sbjct: 190 GGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
>DQ173561-1|ABA00478.2| 64|Homo sapiens SHANK3 protein.
Length = 64
Score = 33.9 bits (74), Expect = 0.69
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 739 GGPXPXXGPGXXPXDXXGPPPRXP 668
GGP P GPG P PPPR P
Sbjct: 5 GGPGPAPGPGPAPPAPPAPPPRGP 28
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.69
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGX-KXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GG R G+G + GA P P G G PPP G PP P
Sbjct: 190 GGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGXKXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXPXXPXXXG 624
GG G G P P P G PPP GPP P P G
Sbjct: 529 GGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLG 584
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGXKXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXPXXPXXXG 624
GG G G P P P G PPP GPP P P G
Sbjct: 529 GGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLG 584
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGXKXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXPXXPXXXG 624
GG G G P P P G PPP GPP P P G
Sbjct: 123 GGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLG 178
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 791 GGXPRGXXXGXGKGXKXRGAXPXXRPXXXPXGXAGTPPPXXXGXGPPXPXXPXXXG 624
GG G G P P P G PPP GPP P P G
Sbjct: 536 GGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLG 591
>BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene family,
member D (S. cerevisiae) protein.
Length = 1033
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 737 GAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GA P P P G +G PPP PP P
Sbjct: 182 GASPLPLPMYRPDGLSGPPPPNAQYQPPPLP 212
>AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein.
Length = 1032
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 737 GAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GA P P P G +G PPP PP P
Sbjct: 182 GASPLPLPMYRPDGLSGPPPPNAQYQPPPLP 212
>AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein.
Length = 570
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 737 GAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GA P P P G +G PPP PP P
Sbjct: 182 GASPLPLPMYRPDGLSGPPPPNAQYQPPPLP 212
>AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein.
Length = 1093
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 737 GAXPXXRPXXXPXGXAGTPPPXXXGXGPPXP 645
GA P P P G +G PPP PP P
Sbjct: 243 GASPLPLPMYRPDGLSGPPPPNAQYQPPPLP 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,530,749
Number of Sequences: 237096
Number of extensions: 1925564
Number of successful extensions: 6913
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6564
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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