Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_L19
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 50 3e-06
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 0.001
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 36 0.088
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 35 0.12
AE014135-140|AAF59409.1| 118|Drosophila melanogaster CG11231-PA... 31 1.4
AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro... 31 1.9
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB... 31 1.9
BT025933-1|ABG02177.1| 403|Drosophila melanogaster IP13276p pro... 30 4.4
AE014297-186|AAN13261.1| 654|Drosophila melanogaster CG31537-PA... 30 4.4
AE014298-1830|AAN09644.1| 582|Drosophila melanogaster CG32644-P... 29 5.8
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 29 7.6
AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein. 29 7.6
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 50.4 bits (115), Expect = 3e-06
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +2
Query: 284 RGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADDTLVTARGADYXXXXXXXXXXXXXXXX 463
+GSVLGP+LW+I +D +L + RGV++ C+ADD +TA
Sbjct: 615 QGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIE 674
Query: 464 XXRRLSLEVALRKSEAV 514
++ L++A K+E V
Sbjct: 675 WLEKVGLKIAAHKTEVV 691
Score = 37.1 bits (82), Expect = 0.029
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Frame = +3
Query: 15 RGRSTMDAVLRVRHLSDRACSE----GG---VLLAVSIDIANAFNTIPWSTIVESLRFHR 173
+G+ST+DA+ V + +A GG +++D+ NAFNT W I+ ++R
Sbjct: 519 KGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNLG 578
Query: 174 VPPSLRTLIEDY 209
VP +R +I +Y
Sbjct: 579 VPDYIRGVIGNY 590
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 41.5 bits (93), Expect = 0.001
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 284 RGSVLGPLLWDI-GFDWVLRGAGLRGVDVVC-YADDTLVTARGADYXXXXXXXXXXXXXX 457
+GSVLGPLL+ + D L G ++ +ADD VT R
Sbjct: 642 QGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRF 701
Query: 458 XXXXRRLSLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITGPAEAQIFGXLL 619
RR ++ + KS VCF RR PPP + + V + P A+ G LL
Sbjct: 702 SEWARRWNIGINSSKSNNVCFTLKRRTPPP---VYIEEVPVPQPNAAKYLGVLL 752
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.088
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 284 RGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADD 385
+GSVLGPLLW+ +D +LR + ++V +ADD
Sbjct: 53 QGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADD 86
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 24 STMDAVLRVRHLSDRACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRVPPSLRTLIE 203
STMDA+LR++H + A S + ++ D AF+ + ++ L + P L LI+
Sbjct: 556 STMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIK 615
Query: 204 DYLS 215
+++
Sbjct: 616 AFMT 619
>AE014135-140|AAF59409.1| 118|Drosophila melanogaster CG11231-PA
protein.
Length = 118
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 105 IDIANAFNTIPWSTIVESLR-FHRVPPSLRTLI 200
+DI NAFN + W+ +ESLR F + S R L+
Sbjct: 1 MDICNAFNAVDWARTLESLRAFKGIYLSTRVLV 33
>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p
protein.
Length = 1052
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = -1
Query: 542 EVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGSLRLCSRLRGPSPACR-RHSTL 366
+ S T +R PP I+ C PPP Q +L +L P+P HS +
Sbjct: 103 QTSSSSSSHTRVRKSSNPPPQPITSCPLSPPPPPPPQQQQQLPQQLPPPTPINNTNHSAI 162
Query: 365 RR-RHAGQHRAGPSRN 321
H H RN
Sbjct: 163 TTPNHNNNHNCNQMRN 178
>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
isoform B protein.
Length = 1052
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = -1
Query: 542 EVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGSLRLCSRLRGPSPACR-RHSTL 366
+ S T +R PP I+ C PPP Q +L +L P+P HS +
Sbjct: 103 QTSSSSSSHTRVRKSSNPPPQPITSCPLSPPPPPPPQQQQQLPQQLPPPTPINNTNHSAI 162
Query: 365 RR-RHAGQHRAGPSRN 321
H H RN
Sbjct: 163 TTPNHNNNHNCNQMRN 178
>BT025933-1|ABG02177.1| 403|Drosophila melanogaster IP13276p
protein.
Length = 403
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 260 FRPHPLLSGKTTFRP*EVILYQGPETRGDAVKPERFHDRAPRDRVEGVGDINRHSQQHAP 81
+ P P+ T F P + P + + E +HD +D E G+ +S H P
Sbjct: 123 YHPPPMAPCVTHFSPMRPLRKTPPPS----IYIEEYHDEPAKDSQESFGNFAAYSDAHQP 178
Query: 80 LGARTIGEVA 51
L I +A
Sbjct: 179 LNEEGIASMA 188
>AE014297-186|AAN13261.1| 654|Drosophila melanogaster CG31537-PA
protein.
Length = 654
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 260 FRPHPLLSGKTTFRP*EVILYQGPETRGDAVKPERFHDRAPRDRVEGVGDINRHSQQHAP 81
+ P P+ T F P + P + + E +HD +D E G+ +S H P
Sbjct: 56 YHPPPMAPCVTHFSPMRPLRKTPPPS----IYIEEYHDEPAKDSQESFGNFAAYSDAHQP 111
Query: 80 LGARTIGEVA 51
L I +A
Sbjct: 112 LNEEGIASMA 121
>AE014298-1830|AAN09644.1| 582|Drosophila melanogaster CG32644-PB
protein.
Length = 582
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 391 QRVVGIAHYVDATQASTAQDPVET-DVPQE-WSQYRPPAGPRTTPLSVPTP 245
Q I HY DA +S + PV+ ++P W+ RP A PR+ P+S P
Sbjct: 173 QNPKNIEHY-DAYPSSDSYGPVQDYELPYPVWAFKRPQAPPRSPPVSYRPP 222
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 284 RGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADDTLVTARG 406
+GS+ GP +WDI D +L+ + YADD L+ G
Sbjct: 634 QGSISGPFIWDILMDVLLQRL-QPYCQLSAYADDLLLLVEG 673
>AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein.
Length = 1096
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 10 PGEVAPPWTRSCASATSPIVRAPRGACCWLCRLISPTPSTRSLGARSWNRSGFTASPLVS 189
PG A T S A+AT+P A +GA +P + GA + +G +
Sbjct: 26 PGGPAAATTTSAAAATTPAASATKGATTTTTTTTNPGSTVGGAGAGTVGGNGVATAAAAG 85
Query: 190 GP 195
P
Sbjct: 86 AP 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,589,042
Number of Sequences: 53049
Number of extensions: 875010
Number of successful extensions: 2650
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2649
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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