Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_L19
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.43
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 31 0.99
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 30 1.7
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 3.0
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 29 3.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 5.3
Z68006-1|CAA91998.1| 251|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 7.0
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 7.0
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G TP T G PQDL E + R PPP +G+
Sbjct: 220 PPPPPKGTGSPTPPPT--GEPQDLSGEGNASRRPPPPPKGT 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL +E + R PPP +G+
Sbjct: 158 PPPPPKGTGSPPPPPT--GEPQDLSTEGNASRRPPPPPKGT 196
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL E + R PPP +G+
Sbjct: 127 PPPPPKGTGSPPPPPT--GEPQDLSGEGNASRRPPPPPKGT 165
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL E + R PPP +G+
Sbjct: 251 PPPPPKGTGSPPPPPT--GEPQDLSGEGNASRRPPPPPKGT 289
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL E + R PPP +G+
Sbjct: 33 PPPPPKGTGTPPPPPT--GEPQDLSGEGNASRRPPPPPKGT 71
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL E + R PPP +G+
Sbjct: 96 PPPPPKGTGTPPPPPT--GEPQDLSGEGNASRRPPPPPKGT 134
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 548 PEEVPSGLGESTPLRTCGGPPQDLISECD*RRWRPPPSQGS 426
P P G G P T G PQDL +E R PPP +G+
Sbjct: 189 PPPPPKGTGTPPPPPT--GEPQDLSAEGYASRRPPPPPKGT 227
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 400 GRHQRVVGIAHYVDATQASTAQDPVETDVPQEWSQYRPPAGPRTTPLSVPTP-SSRGR 230
GR +R V + + P E + P++ R A T +VPTP S+RGR
Sbjct: 378 GRSRRSVATEDTSVTEEVENTEHPTEEETPKQGRGRRSAASSSATSSAVPTPRSTRGR 435
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -2
Query: 394 HQRVVGIAHYVDATQASTAQDP---VETDVPQEWSQYRPPAGPRTTPLSVPTPSSR 236
H +VG Y D TQ T DP + T S PP P T+ + P P SR
Sbjct: 404 HNAIVGGIQY-DMTQQMTTDDPYNNLSTINEPSSSSLPPPQQPSTSSTTEPVPPSR 458
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 38/100 (38%)
Frame = -2
Query: 793 GXNXXXGXEPPRYKTPXARXXQXTRXWGKXXVXGPXHPPAXLGINSPXWWSKRPXTVQQQ 614
G G + PR+K P W + G + +P R + +
Sbjct: 116 GWKDRSGDQTPRFKVPDTPSRMS---WDQDDREGSSRKRNSWDMPTPRGERDRKRYMDSE 172
Query: 613 XPKYLSFGWTSDRYSADYEIRSRRRSPPDWVKAHRFGLAE 494
+ +S W S+R + D E R R R P D V++ + AE
Sbjct: 173 --RSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAE 210
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 373 AHYVDATQASTAQDPVETDVPQEWSQYRPPAGPRTTPLSVPTPS 242
A + D + +DP T P YR P+ TP +P+P+
Sbjct: 468 AEFADEPECEWIRDPTPTPPPSPQPVYRLPSPKPVTPEPLPSPT 511
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 38/100 (38%)
Frame = -2
Query: 793 GXNXXXGXEPPRYKTPXARXXQXTRXWGKXXVXGPXHPPAXLGINSPXWWSKRPXTVQQQ 614
G G + PR+K P W + G + +P R + +
Sbjct: 116 GWKDRSGDQTPRFKVPDTPSRMS---WDQDDREGSSRKRNSWDMPTPRGERDRKRYMDSE 172
Query: 613 XPKYLSFGWTSDRYSADYEIRSRRRSPPDWVKAHRFGLAE 494
+ +S W S+R + D E R R R P D V++ + AE
Sbjct: 173 --RSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAE 210
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 331 PVETDVPQEWSQYRPPAGPRTTPLSVPT 248
P++T VPQ+W+ P GP TP P+
Sbjct: 338 PIKTTVPQQWTTL--PPGPEPTPGQGPS 363
>Z68006-1|CAA91998.1| 251|Caenorhabditis elegans Hypothetical
protein K09C8.2 protein.
Length = 251
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 57 LSDRACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRVPPSLRTLIEDYLS 215
L AC+ G L+AV I FN P+S + +F R+P + +E YL+
Sbjct: 100 LGHLACA-GLFLVAVLIAWVRDFNYDPFSIQQSTCQFTRIPDACDVSLEQYLA 151
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 307 EWSQYRPPAGPRTTPLSVP 251
++S+YRP GP+T PL P
Sbjct: 67 DYSEYRPRRGPKTPPLPPP 85
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 340 AQDPVETDVPQEWSQYRPPAGPRTTPLSVP 251
A+DPV T P+E + PPA P P +VP
Sbjct: 360 AEDPVVTPAPEELTTPPPPAPPPPAP-AVP 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,105,915
Number of Sequences: 27780
Number of extensions: 393796
Number of successful extensions: 1160
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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