Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L19
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.84 
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    25   1.1  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    25   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 243 EGVGTESGVVRGPAGGRYWDHSCGTSVSTGSCAVLA 350
           +G+    G+ RG +GG+ W +S    V+     ++A
Sbjct: 890 QGMNVPYGMQRGQSGGQTWSNSQVQGVAVPGSGIVA 925


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 491 PPQDLISECD*RRWRPPPSQGSLRLCSRLRGPSPACR 381
           P  ++ S CD R  R  P+     LC ++  P   CR
Sbjct: 38  PSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCR 74


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 491 PPQDLISECD*RRWRPPPSQGSLRLCSRLRGPSPACR 381
           P  ++ S CD R  R  P+     LC ++  P   CR
Sbjct: 38  PSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCR 74


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 58   RWRTRKTASMVERPLXET 5
            RWR+R     ++RP+ E+
Sbjct: 1634 RWRSRYLGDRMQRPMKES 1651


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 58   RWRTRKTASMVERPLXET 5
            RWR+R     ++RP+ E+
Sbjct: 1630 RWRSRYLGDRMQRPMKES 1647


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 292  RPPAGPRTTPLSVPTPSSRGRLHFGPER*SS 200
            RP   P T  LS P+PS RGR   G +R +S
Sbjct: 1368 RPERVP-TVDLS-PSPSDRGRNDDGSDRLTS 1396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,361
Number of Sequences: 438
Number of extensions: 5770
Number of successful extensions: 84
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)