Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L14
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z82260-5|CAB05133.1|  194|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +2

Query: 215 LSEKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPL 394
           + +K K+   +G  L   Q  G F++  S    KLD + WPLLLKN+D+LNVRTNHYTP 
Sbjct: 1   MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60

Query: 395 PFGNSPLKR 421
             G SPLKR
Sbjct: 61  VEGVSPLKR 69



 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 33/55 (60%), Positives = 41/55 (74%)
 Frame = +3

Query: 426 ISDYVKSGFINVDXPSNPSSHEVVSWIKRILKVEKNGSFXPARSEVTGWLIVCLN 590
           I +Y+ SGF N+D PSNPSSHEVVSWIKRIL+ EK G       +V+G LIVC++
Sbjct: 71  IKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCLIVCID 125


>Z82260-5|CAB05133.1|  194|Caenorhabditis elegans Hypothetical
           protein C32H11.6 protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 214 TFREEKEKKQGWCFVGSFSDNWRLQNRTFGEREEAGHRLLAFVVEKLRS 360
           T  E  +K   W      +D W +   T+  REE  +++   V E+L S
Sbjct: 56  TIAERDQKSAEWAEKHGIADKWAVFYSTWQAREEKFNKIKTTVFERLPS 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,639,669
Number of Sequences: 27780
Number of extensions: 332588
Number of successful extensions: 857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)