Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_L13
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 45 8e-05
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 45 8e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 44 1e-04
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 44 1e-04
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 44 2e-04
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 44 2e-04
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 42 4e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 42 4e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 42 4e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 42 4e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 42 6e-04
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 42 6e-04
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 42 6e-04
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 42 6e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 42 8e-04
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 41 0.001
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 41 0.001
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 40 0.002
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 40 0.002
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 40 0.002
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 40 0.003
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 40 0.003
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 40 0.003
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 40 0.003
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 39 0.004
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 39 0.004
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 39 0.004
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 39 0.005
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 39 0.005
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 38 0.007
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 38 0.007
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 38 0.010
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 38 0.010
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.010
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.010
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.017
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 37 0.017
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 37 0.017
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 37 0.017
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 37 0.017
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 37 0.017
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 37 0.017
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 37 0.017
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 37 0.017
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 37 0.017
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 37 0.017
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 35 0.067
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 35 0.067
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 35 0.067
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.067
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.067
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.067
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 35 0.089
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 34 0.16
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.21
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 33 0.21
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.21
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 33 0.21
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.36
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 33 0.36
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.36
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.36
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 32 0.47
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 32 0.47
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 30 1.9
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 30 2.5
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 30 2.5
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 29 4.4
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 418
L+M W DK+L WN +WG ++ + S+++W PD+VL N A
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNA 121
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAA--STAGALRSP 448
+++W PD+++ N A A+R+P
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAP 167
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAA--STAGALRSP 448
+++W PD+++ N A A+R+P
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAP 167
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAA--STAGALRSP 448
+++W PD+++ N A A+R+P
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAP 167
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
N+ E ++ L M W D +L WN E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
N+ E ++ L M W D +L WN E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAAS 424
+++W PD+++ N S
Sbjct: 142 DKIWVPDIIVFNMVKS 157
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAAS 424
+++W PD+++ N S
Sbjct: 142 DKIWVPDIIVFNMVKS 157
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 376
PP + V L L H I E + T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 377 ERLWRPDVVLLNAAAS 424
+++W PD+++ N S
Sbjct: 142 DKIWVPDIIVFNMVKS 157
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 418
++ E + + + L +W+D RL WN E+G T + E LW PD++L N A
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNA 98
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
L +NW+D RL WN W + R+W+PD++L+N A
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 368 -VSSERLWRPDVVLLNAA 418
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 368 -VSSERLWRPDVVLLNAA 418
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 368 -VSSERLWRPDVVLLNAA 418
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 382
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 383 LWRPDVVLLNA 415
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 227 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVV 403
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 404 LLNAAASTAGALRSPG 451
L N+A + +L G
Sbjct: 114 LYNSARGNSWSLYLTG 129
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 418
L+M W D RL W+ G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 200 SLPPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVS 373
S P + + L L L ++ E + + L+ WID++L W+ +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 374 SERLWRPDVVLLNAAAS 424
E +W PD+VL N A S
Sbjct: 105 YEMIWVPDIVLYNNADS 121
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 200 SLPPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVS 373
S P + + L L L ++ E + + L+ WID++L W+ +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 374 SERLWRPDVVLLNAAAS 424
E +W PD+VL N A S
Sbjct: 105 YEMIWVPDIVLYNNADS 121
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 200 SLPPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVS 373
S P + + L L L ++ E + + L+ WID++L W+ +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 374 SERLWRPDVVLLNAAAS 424
E +W PD+VL N A S
Sbjct: 105 YEMIWVPDIVLYNNADS 121
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 227 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVV 403
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 404 LLNAA 418
L N+A
Sbjct: 114 LYNSA 118
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 224 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 400
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 401 VLLNAAASTAGA 436
+ N+A+ A
Sbjct: 134 KVSNSASGLGSA 145
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 224 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 400
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 401 VLLNAAASTAGA 436
+ N+A+ A
Sbjct: 134 KVSNSASGLGSA 145
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 242 HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 400
+L+ ++E + + ++ ++ W D RL WNA W +T + + +++W P +
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIYMKQDKVWSPTI 133
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 221 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 394
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 395 DVVLLNAA 418
DVVL N A
Sbjct: 112 DVVLYNNA 119
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 221 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 394
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 395 DVVLLNAA 418
DVVL N A
Sbjct: 112 DVVLYNNA 119
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
+ E + V I L++ WID+ L W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNA 122
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 368 -VSSERLWRPDVVLLNAA 418
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 221 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL---VSSERLW 388
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 389 RPDVVLLNAA 418
+PDV+L N+A
Sbjct: 113 KPDVLLYNSA 122
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 368 -VSSERLWRPDVVLLNAA 418
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 188 RTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL 367
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 368 -VSSERLWRPDVVLLNAA 418
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
+ E + V I L++ WID+ L W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNA 122
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCS-TWLVSS 376
PP ++ ++ + L H I E +++L + W D L W E+ G TWL
Sbjct: 86 PPDGRVDISHNIELVHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PE 144
Query: 377 ERLWRPDVVLLNAA--ASTAGALRSP 448
+W PD+++ N A+RSP
Sbjct: 145 HSIWIPDIIVFNTLEHKMLLEAVRSP 170
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 227 VNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 400
V L L L+ ++ E + ++ Q W D +L W+ E+G T L + LW+PD+
Sbjct: 52 VKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLRWSPEEYGNITTLQIPHGTLWKPDI 111
Query: 401 VLLNAA 418
+L N+A
Sbjct: 112 LLFNSA 117
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +2
Query: 215 SKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRP 394
+K+V ++ + + I E V++ ++W D + W+ +WG S ++W P
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTP 142
Query: 395 DVVLLNAAAST 427
++V +N +++
Sbjct: 143 NIVQINGGSTS 153
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 227 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV---SSERLWRP 394
V + L L+ ++ E V + A L W D +L W ++G + SS+ +W+P
Sbjct: 53 VKIKLFLQQILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKP 112
Query: 395 DVVLLNAAA 421
DV+L N+AA
Sbjct: 113 DVLLYNSAA 121
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 221 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 394
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 395 DVVLLNAA 418
DV++ N+A
Sbjct: 111 DVLMYNSA 118
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 245 LRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 421
+R ++ E + L+M W D +L W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 245 LRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 421
+R ++ E + L+M W D +L W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 176 RSSQRTIGSLPPXSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG 352
R + T+ S P +VV+L + L+ N+ E E + + A L+ W D+ L W +
Sbjct: 35 REERPTLDSSKP---VVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLRWEPTAYE 91
Query: 353 CSTWL-VSSERLWRPDVVLLNAAAS 424
T L + LW PD++L N+ S
Sbjct: 92 NVTDLRHPPDALWTPDILLYNSVDS 116
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 LTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 394
L +L+ ++E E V ++ +L W D RL WN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 206 PPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 382
PP +I + L++ ++ + E E L D + +W D RL W+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 383 LWRPDVVLLNAA 418
+W P+ +++ +
Sbjct: 138 VWIPETTIVDCS 149
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWGCSTW-LVSSERLWRPDV 400
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWGCSTW-LVSSERLWRPDV 400
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 242 HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLWRP 394
+L+ + E E V ++ +L W D RL WNA ++ T + + E++W P
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIFTRQEKIWSP 132
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 233 LTLHLRHA-----NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 394
+T+HL+ A ++ E V + A L W D L W+ E+G T + + ++W+P
Sbjct: 48 VTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKP 107
Query: 395 DVVLLNA 415
DV+L N+
Sbjct: 108 DVLLYNS 114
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
+ E++ + + ++ W D+ L WN ++G + V SE +W+PD+++ N A
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 117
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
+ E++ + + ++ W D+ L WN ++G + V SE +W+PD+++ N A
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 117
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 224 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 391
V+N+T+ + N + E ++IL +W D L W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 392 PDVVLLNAAAST 427
PD + N T
Sbjct: 120 PDGYIFNTVEET 131
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 418
+ E++ + + ++ W D+ L WN ++G + V SE +W+PD+++ N A
Sbjct: 48 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 101
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 233 LTLHLRHA-----NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 394
+T+HL+ A ++ E V + A L W D L W+ E+G T + + ++W+P
Sbjct: 48 VTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKP 107
Query: 395 DVVLLNA 415
DV+L N+
Sbjct: 108 DVLLYNS 114
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 224 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 391
V+N+T+ + N + E ++IL +W D L W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 392 PDVVLLNAAAST 427
PD + N T
Sbjct: 120 PDGYIFNTVEET 131
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 233 LTLHLRHA-----NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 394
+T+HL+ A ++ E V + A L W D L W+ E+G T + + ++W+P
Sbjct: 48 VTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKP 107
Query: 395 DVVLLNA 415
DV+L N+
Sbjct: 108 DVLLYNS 114
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 233 LTLHLRHA-----NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 394
+T+HL+ A ++ E V + A L W D L W+ E+G T + + ++W+P
Sbjct: 48 VTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKP 107
Query: 395 DVVLLNA 415
DV+L N+
Sbjct: 108 DVLLYNS 114
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 215 SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLXWNAGEWGCSTWL-VSSER 382
SK +N+T I + + +IL ++++W+D +L W+ + T + + S++
Sbjct: 21 SKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSDK 80
Query: 383 LWRPDVVLLNAA 418
+W+PD++L N A
Sbjct: 81 IWKPDIILYNNA 92
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 221 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LWRP 394
+++N++++ + +E T+ ++ + W D+ L WN ++ TWL E LW P
Sbjct: 53 LIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 395 DVVL 406
D +
Sbjct: 112 DTTV 115
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 194 IGSLPPX----SKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCS 358
I S+PP + +N L+H + E + I L+++W D RL WN W +
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKN 106
Query: 359 TWLVSS-ERLWRP 394
+V S +W P
Sbjct: 107 KLVVHSFHHIWVP 119
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 394
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 395 DVVLLNA 415
D L N+
Sbjct: 138 DTYLYNS 144
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 LTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 394
L +L+ ++E V ++ +L W D RL WN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 418
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL N A
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 418
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL N A
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 394
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 395 DVVLLNA 415
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 394
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 395 DVVLLNA 415
D L N+
Sbjct: 138 DTYLYNS 144
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 239 LHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 391
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 221 IVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LWRP 394
+ +N++++ + + +E T+ + + W D+ L WN ++ TWL E LW P
Sbjct: 53 LFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 395 DVVL 406
D +
Sbjct: 112 DTTV 115
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAST 427
+ E +++L +W D L W+ EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEET 124
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNA 415
L+M+W D L W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 227 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDV 400
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 401 VLLNA 415
L N+
Sbjct: 193 YLYNS 197
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNA 415
L+M+W D L W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 266 ESESTVRILADLQMNWIDKRLXWNAGEWGCST-WL-VSSERLWRPDVVLLN 412
+++ T++ + + W D L WN W+ +S+ R W PDV+ N
Sbjct: 67 QTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 257 NIRESESTVRILADLQMNWIDKRLXWNAGEWG------CSTWLVSSERLWRPDVVLLNAA 418
++ E + ILA + +W D +L W+ +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 419 AST 427
+ +
Sbjct: 119 SES 121
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 281 VRILADLQMNWIDKRLXWNAGEWGCST---WLVSSERLWRPDVVLLNAAA 421
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+A+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSAS 61
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 215 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLW 388
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 389 RPDVVLLNA 415
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 215 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLW 388
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 389 RPDVVLLNA 415
PD L N+
Sbjct: 110 LPDTTLYNS 118
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 209 PXSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSSE 379
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 380 RLWRPDVVLLN 412
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 209 PXSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSSE 379
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 380 RLWRPDVVLLN 412
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 242 HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVL 406
+L+ + E E V ++ ++ W D R+ W++ +G L + +++W P + L
Sbjct: 80 YLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLHMRQDKVWSPTLSL 135
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 260 IRESESTVRILADLQMNWIDKRLXWN-AGEWGC--STWLVSSERLWRPDVV 403
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 245 LRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNA 415
L+ + E V ++ ++ W D RL WNA + T+ +W P + A
Sbjct: 81 LKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFYTRQSNVWSPTLSAFGA 138
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 299 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNA 415
L M W D+RL N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 266 ESESTVRILADLQMNWIDKRLXWNAGEWGCS-TWL-VSSERLWRPDVV 403
+++ T+ + + W D L WN + + W+ +S R+W PDV+
Sbjct: 67 QTQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 221 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERL-WRP 394
++V++T+ L +RE++ + W D +L WN + T +V L W P
Sbjct: 66 VIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLAWNPADHSGLTQVVMPRSLVWVP 125
Query: 395 DVVLLNA 415
+ + N+
Sbjct: 126 KLFIYNS 132
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 221 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 394
++VN+T+ L ++E++ + W D RL W+ ++ G +V +W P
Sbjct: 93 VLVNMTIVLGILIELKENQQLAAYVISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIP 152
Query: 395 DVVLLNAAAS 424
+ + N+ S
Sbjct: 153 KLFVYNSLES 162
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 LTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 394
L L+ + E + V ++ ++ W D RL WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,640,687
Number of Sequences: 27780
Number of extensions: 295716
Number of successful extensions: 911
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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