Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L10
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   130   2e-30
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   128   7e-30

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  130 bits (313), Expect = 2e-30
 Identities = 68/161 (42%), Positives = 87/161 (54%)
 Frame = +3

Query: 51  FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
           F+ P  G    +P +    HRGKVK  P         +     G KAGMTH VRE ++PG
Sbjct: 6   FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFV-GYKAGMTHIVREVEKPG 64

Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
             +  KE   A TII TPP+V V +V Y+  P GLR L++VWA+H+SE    RFY NW  
Sbjct: 65  SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCK 124

Query: 411 CMKKACXKXSQKWXDELGRXSXXKDFMKMIXYCSVVRVIAH 533
             KKA  K + K+  + G+        KM  Y S+VRVIAH
Sbjct: 125 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAH 165



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 38  SHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
           SHRKF  PRHGS+G  P  R R S   G+V++   DD + P H T  +G
Sbjct: 2   SHRKFEHPRHGSLGFLP--RKRSSRHRGKVKSFPKDDVSKPCHLTSFVG 48


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  128 bits (308), Expect = 7e-30
 Identities = 68/161 (42%), Positives = 86/161 (53%)
 Frame = +3

Query: 51  FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
           F+ P  G    +P +    HRGKVK  P         +     G KAGMTH VRE ++PG
Sbjct: 6   FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFV-GYKAGMTHIVREVEKPG 64

Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
             +  KE   A TII TPP+V V +V Y+  P GLR L++VWA+H+SE    RFY NW  
Sbjct: 65  SKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCK 124

Query: 411 CMKKACXKXSQKWXDELGRXSXXKDFMKMIXYCSVVRVIAH 533
             KKA  K + K+  + G+        KM  Y SVVRVI H
Sbjct: 125 SKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVH 165



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 38  SHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
           SHRKF  PRHGS+G  P  R R S   G+V++   DD   P H T  +G
Sbjct: 2   SHRKFEHPRHGSLGFLP--RKRSSRHRGKVKSFPKDDVNKPCHLTSFVG 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,329,066
Number of Sequences: 37544
Number of extensions: 208077
Number of successful extensions: 160
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)