Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_L10
(818 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 166 3e-41
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 166 3e-41
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 166 3e-41
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 163 3e-40
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 163 3e-40
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 117 2e-26
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 105 5e-23
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 166 bits (404), Expect = 3e-41
Identities = 82/173 (47%), Positives = 99/173 (57%)
Frame = +3
Query: 51 FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
F P G P + HRGKVK P + + G KAGMTH VRE DRPG
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPG 75
Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
I KE+V A T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY
Sbjct: 76 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 135
Query: 411 CMKKACXKXSQKWXDELGRXSXXKDFMKMIXYCSVVRVIAHXXMXLXDSDQXR 569
KKA K S+KW D+LG+ S DF KM+ YC V+RVIAH + L Q +
Sbjct: 136 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 188
Score = 54.4 bits (125), Expect = 2e-07
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 11 FS*LLXSSXSHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
F+ L + SHRKFSAPRHGSM YP RS G+V+A DD + PVH T IG
Sbjct: 4 FTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHR--GKVKAFPKDDASKPVHLTCFIG 59
Score = 43.2 bits (97), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 548 VRQRPXKARXMXIHLNGGTXXDKVKWXXQHLXK 646
++QR KA M I LNGG+ DKVKW +HL K
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEK 214
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 166 bits (404), Expect = 3e-41
Identities = 82/173 (47%), Positives = 99/173 (57%)
Frame = +3
Query: 51 FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
F P G P + HRGKVK P + + G KAGMTH VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPG 64
Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
I KE+V A T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 124
Query: 411 CMKKACXKXSQKWXDELGRXSXXKDFMKMIXYCSVVRVIAHXXMXLXDSDQXR 569
KKA K S+KW D+LG+ S DF KM+ YC V+RVIAH + L Q +
Sbjct: 125 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 177
Score = 52.8 bits (121), Expect = 5e-07
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 38 SHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
SHRKFSAPRHGSM YP RS G+V+A DD + PVH T IG
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHR--GKVKAFPKDDASKPVHLTCFIG 48
Score = 43.2 bits (97), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 548 VRQRPXKARXMXIHLNGGTXXDKVKWXXQHLXK 646
++QR KA M I LNGG+ DKVKW +HL K
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEK 203
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 166 bits (404), Expect = 3e-41
Identities = 82/173 (47%), Positives = 99/173 (57%)
Frame = +3
Query: 51 FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
F P G P + HRGKVK P + + G KAGMTH VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPG 64
Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
I KE+V A T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 124
Query: 411 CMKKACXKXSQKWXDELGRXSXXKDFMKMIXYCSVVRVIAHXXMXLXDSDQXR 569
KKA K S+KW D+LG+ S DF KM+ YC V+RVIAH + L Q +
Sbjct: 125 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 177
Score = 52.8 bits (121), Expect = 5e-07
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 38 SHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
SHRKFSAPRHGSM YP RS G+V+A DD + PVH T IG
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHR--GKVKAFPKDDASKPVHLTCFIG 48
Score = 43.2 bits (97), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 548 VRQRPXKARXMXIHLNGGTXXDKVKWXXQHLXK 646
++QR KA M I LNGG+ DKVKW +HL K
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEK 203
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 163 bits (396), Expect = 3e-40
Identities = 79/161 (49%), Positives = 96/161 (59%)
Frame = +3
Query: 87 PXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPGXXIXXKEIVXAX 266
P + HRGKVK P + + G KAGMTH VRE DRPG I KE+V A
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 267 TIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYICMKKACXKXSQK 446
T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY KKA K S+K
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKK 123
Query: 447 WXDELGRXSXXKDFMKMIXYCSVVRVIAHXXMXLXDSDQXR 569
W D+LG+ S DF KM+ YC V+RVIAH + L Q +
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 164
Score = 43.2 bits (97), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 548 VRQRPXKARXMXIHLNGGTXXDKVKWXXQHLXK 646
++QR KA M I LNGG+ DKVKW +HL K
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEK 190
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 163 bits (396), Expect = 3e-40
Identities = 79/161 (49%), Positives = 96/161 (59%)
Frame = +3
Query: 87 PXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPGXXIXXKEIVXAX 266
P + HRGKVK P + + G KAGMTH VRE DRPG I KE+V A
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 267 TIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYICMKKACXKXSQK 446
T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY KKA K S+K
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKK 123
Query: 447 WXDELGRXSXXKDFMKMIXYCSVVRVIAHXXMXLXDSDQXR 569
W D+LG+ S DF KM+ YC V+RVIAH + L Q +
Sbjct: 124 WTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 164
Score = 43.2 bits (97), Expect = 4e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 548 VRQRPXKARXMXIHLNGGTXXDKVKWXXQHLXK 646
++QR KA M I LNGG+ DKVKW +HL K
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEK 190
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 117 bits (282), Expect = 2e-26
Identities = 57/120 (47%), Positives = 68/120 (56%)
Frame = +3
Query: 51 FQXPAMGLWDXIPXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPG 230
F P G P + HRGKVK P + + G KAGMTH VRE DRPG
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPG 64
Query: 231 XXIXXKEIVXAXTIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXNWYI 410
I KE+V A T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY NWY+
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYV 124
Score = 52.8 bits (121), Expect = 5e-07
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 38 SHRKFSAPRHGSMGXYPXXRSRXSSW*GQVRAL-XDDPTXPVHXTXXIG 181
SHRKFSAPRHGSM YP RS G+V+A DD + PVH T IG
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHR--GKVKAFPKDDASKPVHLTCFIG 48
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 105 bits (253), Expect = 5e-23
Identities = 52/105 (49%), Positives = 62/105 (59%)
Frame = +3
Query: 87 PXRGPVXHRGKVKCVP*XTTLPNLSIXLXXSGXKAGMTHXVREPDRPGXXIXXKEIVXAX 266
P + HRGKVK P + + G KAGMTH VRE DRPG I KE+V A
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFI-GYKAGMTHIVREADRPGSKINKKEVVEAV 63
Query: 267 TIIXTPPMVXVXVVGYIDXPXGLRXLSTVWAEHMSEXXXXRFYXN 401
T++ TPPM+ V VGYI+ P GLR L VWA+H+SE RFY N
Sbjct: 64 TVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,593,923
Number of Sequences: 53049
Number of extensions: 337957
Number of successful extensions: 208
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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