Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L09
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p pro...    29   9.0  
AF132566-1|AAD27865.2|  528|Drosophila melanogaster LD24380p pro...    29   9.0  
AE014134-212|AAF51408.2|  424|Drosophila melanogaster CG33979-PA...    29   9.0  
AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB...    29   9.0  

>BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p
           protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 GGFPPXPPKXXFXPPPP 204
           GG PP PP     PPPP
Sbjct: 534 GGAPPPPPPGGLPPPPP 550


>AF132566-1|AAD27865.2|  528|Drosophila melanogaster LD24380p
           protein.
          Length = 528

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 GGFPPXPPKXXFXPPPP 204
           GG PP PP     PPPP
Sbjct: 279 GGAPPPPPPGGLPPPPP 295


>AE014134-212|AAF51408.2|  424|Drosophila melanogaster CG33979-PA,
           isoform A protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 GGFPPXPPKXXFXPPPP 204
           GG PP PP     PPPP
Sbjct: 175 GGAPPPPPPGGLPPPPP 191


>AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB,
           isoform B protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 154 GGFPPXPPKXXFXPPPP 204
           GG PP PP     PPPP
Sbjct: 534 GGAPPPPPPGGLPPPPP 550


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,674,485
Number of Sequences: 53049
Number of extensions: 232344
Number of successful extensions: 962
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)