Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L01
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1313 - 36212524-36213669                                         30   2.4  
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081...    29   3.2  

>01_06_1313 - 36212524-36213669
          Length = 381

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -3

Query: 613 LGEALAMTDMDPPTVSCGFTPESFSKHRTYVALYFKFQFSLIALTRALSVSV 458
           +G+      M PPT S      SF  HR+ V  +F     L+A   AL V V
Sbjct: 224 IGKEKTAMRMAPPTFSTEEEKSSFEIHRSGVVTFFAVFSMLVATAMALLVKV 275


>01_05_0606 -
           23607170-23607568,23607738-23607941,23608035-23608113,
           23608371-23608430,23608514-23608611,23608703-23608891,
           23610670-23611368
          Length = 575

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 255 GSEGGEPLPPANIPIDAVWQPVAGTR 332
           G  G EP PP   P +++W P+   R
Sbjct: 106 GDNGDEPRPPTVAPAESLWAPIGWRR 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,229,185
Number of Sequences: 37544
Number of extensions: 416177
Number of successful extensions: 1334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)