Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_L01
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA...    66   7e-11
AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p pro...    29   5.5  
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB...    29   5.5  
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA...    29   5.5  
AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p pro...    29   7.2  
AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA ...    29   7.2  

>AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA
           protein.
          Length = 803

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
 Frame = +3

Query: 294 PIDAVWQPVAGTRFRFYVYSAYVEXXXXXXXXXXXXXXXX-GADPVICRLWLPDNR---- 458
           PID  WQ V GTRF+F+VYSAY +                 G + V CR W   +     
Sbjct: 242 PIDGAWQVVNGTRFKFFVYSAYFDRREGARLVRVVGATKTRGPERVWCRFWYGPSAGNGT 301

Query: 459 ------------TLTLKARVKAIRENWNLKYSATYVLC 536
                       + T+ ARVK IRENWNLKYSA ++LC
Sbjct: 302 DAGSSTARAKYSSATVMARVKIIRENWNLKYSACFILC 339


>AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p
           protein.
          Length = 1038

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 192 NEPARALYNEDMQTWQGRTETGSEGGEPLP-PANIPI 299
           N P +AL+ +D    +G  ETGSE  E +P PA  PI
Sbjct: 232 NNPWKALHMQDSS--EGEWETGSESDEGVPTPAQPPI 266


>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
            isoform B protein.
          Length = 2347

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 192  NEPARALYNEDMQTWQGRTETGSEGGEPLP-PANIPI 299
            N P +AL+ +D    +G  ETGSE  E +P PA  PI
Sbjct: 1494 NNPWKALHMQDSS--EGEWETGSESDEGVPTPAQPPI 1528


>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
            isoform A protein.
          Length = 2451

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 192  NEPARALYNEDMQTWQGRTETGSEGGEPLP-PANIPI 299
            N P +AL+ +D    +G  ETGSE  E +P PA  PI
Sbjct: 1494 NNPWKALHMQDSS--EGEWETGSESDEGVPTPAQPPI 1528


>AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 335 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 511
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 512 IQCNV 526
            +  +
Sbjct: 172 AKAEM 176


>AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA
           protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 335 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 511
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 512 IQCNV 526
            +  +
Sbjct: 172 AKAEM 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,197,952
Number of Sequences: 53049
Number of extensions: 685108
Number of successful extensions: 2312
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)