Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_K14
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.075
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.40
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.53
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 5e-04
Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +2
Query: 545 NSPXAAARXXXPXPKTPXGRXPPLX-LGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXT 721
+S A + P P P P L LG S P P P PP P P
Sbjct: 380 SSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP-PVPTPPSLPPSAPP--SLPPSAP 436
Query: 722 PXAPXSKPSA-XXPPSXXYAPPXXXXXXAPXPXXPRA 829
P P P+A PPS APP A P P A
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +2
Query: 560 AARXXXPXPKTPXGRXPPLXLGGVXXXSPPXPXXEXPXXPP--PXSPXGXXXPXXTPXAP 733
A+R P TP PP + +PP P PP P +P P P AP
Sbjct: 409 ASRTSTPPVPTPPS-LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 734 XSKPSAXXPP 763
P+A PP
Sbjct: 468 PLPPAAPAPP 477
Score = 30.7 bits (66), Expect = 0.30
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Frame = +2
Query: 551 PXAAARXXXPXPKTPX--GRXPPLXLGGVXXXSPPXPXXEXP-XXPPPXSPXGXXXPXXT 721
P + P P++ GR PP +PP P P P P G T
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 722 P--XAPXSKPSAXXPPSXXYAPPXXXXXXAPXPXXP 823
P P S P + P APP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +2
Query: 644 PPXPXXEXPXXPPPXSPXGXXX-PXXTPXAPXSKPSAXXPPSXXYAPPXXXXXXAPXP 814
PP P PP P G P P AP + P P APP AP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP---LPAGMPAAPPLPPAAPAPPP 478
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/93 (23%), Positives = 27/93 (29%)
Frame = +3
Query: 456 APVSXXHPXAXRSXGPXXXAPPRXPXAAXXTXPPRRPVXXXXXRRPPXAXPPLXRSGXXN 635
APVS +P + P P AA +RP R PP+ +
Sbjct: 276 APVSM-NPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNS 334
Query: 636 XXPPPXRXPXXXXXXPXXXRPXXAXPAXXPXPR 734
PPP P P P PR
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/90 (28%), Positives = 29/90 (32%)
Frame = +3
Query: 456 APVSXXHPXAXRSXGPXXXAPPRXPXAAXXTXPPRRPVXXXXXRRPPXAXPPLXRSGXXN 635
AP A R+ P PP P +A + PP P A PPL S
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG---APAAPPLPPSAPI- 455
Query: 636 XXPPPXRXPXXXXXXPXXXRPXXAXPAXXP 725
P P P P P A PA P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPA-PAPAP 484
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +2
Query: 641 SPPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPPXXXXXXAPXPXX 820
+PP P P PP P P P S + PP+ +PP AP
Sbjct: 229 APPIPP-SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN---SPP---RPIAPVSMN 281
Query: 821 PRAXRXGGPXXXPP 862
P P PP
Sbjct: 282 PAINSTSKPPLPPP 295
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 26/110 (23%), Positives = 34/110 (30%), Gaps = 1/110 (0%)
Frame = +2
Query: 455 GPRLXSXPXXGPVRGXXXXXXXXXXXXGRXNSPXAA-ARXXXPXPKTPXGRXPPLXLGGV 631
GPR + P P + + P A ++ P P R PP+
Sbjct: 960 GPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSS 1019
Query: 632 XXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAP 781
P P + P P P + P TP P S A P AP
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 32.7 bits (71), Expect = 0.075
Identities = 29/120 (24%), Positives = 34/120 (28%), Gaps = 2/120 (1%)
Frame = +2
Query: 548 SPXAAARXXXPXPKTPXGRXPPLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPX 727
SP A P PK + PP+ L P P P P +P P
Sbjct: 1003 SPAAPLARVPPVPKLS-SKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPS 1061
Query: 728 APXSKPSAXXPPSXXYAPPXXXXXXAP--XPXXPRAXRXGGPXXXPPXXXXXXPXRXGXP 901
AP P+ AP AP P P+ P P P G P
Sbjct: 1062 APPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 32.7 bits (71), Expect = 0.075
Identities = 23/88 (26%), Positives = 27/88 (30%)
Frame = +2
Query: 551 PXAAARXXXPXPKTPXGRXPPLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXA 730
P A P PK P PP+ V P P P P + P P
Sbjct: 1084 PVPAPSGIPPVPK-PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 731 PXSKPSAXXPPSXXYAPPXXXXXXAPXP 814
P +A P+ APP A P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 28.7 bits (61), Expect = 1.2
Identities = 30/122 (24%), Positives = 32/122 (26%), Gaps = 1/122 (0%)
Frame = +2
Query: 551 PXAAARXXXPXPKTPXGRXPPLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXA 730
P A P PK P PP+ P P P PPP P
Sbjct: 1151 PVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP-SVGVP 1208
Query: 731 PXSKPSAXXP-PSXXYAPPXXXXXXAPXPXXPRAXRXGGPXXXPPXXXXXXPXRXGXPXX 907
P PS P P+ P A P P A P P P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP-APSSEAPSVSTPRSSVPSPHSNASPSP 1267
Query: 908 AS 913
S
Sbjct: 1268 TS 1269
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/99 (26%), Positives = 28/99 (28%), Gaps = 6/99 (6%)
Frame = +2
Query: 545 NSPXAAARXXXPXPKTPXGRXP-PLXLGGVXXXSPPXPXX--EXPXXPPPXSPXGXXXPX 715
++P P P P P G PP P E P P P P
Sbjct: 1030 DAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS 1089
Query: 716 XTPXAPXSKPSAXXPP---SXXYAPPXXXXXXAPXPXXP 823
P P KPS PP PP AP P
Sbjct: 1090 GIPPVP--KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/84 (28%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Frame = +2
Query: 578 PXPKTPXGRX---PPLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPS 748
P PK+ G PP+ S P P P P P P P KPS
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP--KPS 1108
Query: 749 AXXPP--SXXYAPPXXXXXXAPXP 814
PP + APP A P
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPP 1132
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.075
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = +2
Query: 644 PPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPPXXXXXXAPXPXXP 823
PP P PPP P P P S P P + +PP + P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 641 SPPXPXXEXP---XXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPP 784
+PP P P PPP P P +P + S PSA P PP
Sbjct: 157 APPIPSKAPPIPSSLPPPAQPAA---PVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +2
Query: 611 PLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPP 784
P+ V S P P PPP P P P P PSA PP + P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP--PMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +2
Query: 668 PXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPP-XXXXXXAPXPXXPRAXRXGG 844
P PP P P + P P + PP APP AP P P +
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS--APPMPAGPPSAPPPPLPASSAPSV 1743
Query: 845 P 847
P
Sbjct: 1744 P 1744
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 101 GAIASAXECEKPTSLVPHESXSPPPXXXXXGXFPPPXPKKIXXPPXHPP 247
G +A A P V +S +PP PPP P + PP PP
Sbjct: 1679 GGMAPAHPVSTPP--VRPQSAAPPQMSAPT---PPPPPMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 131 KPTSLVPHESXSPPPXXXXXGXFPPP-XPKKIXXPPXHPP 247
+P S P + +P P PPP P PP PP
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 323 PPPPPPXXGVAXA-PPTXGXAPFFXKXGG 240
PPPPPP GVA A PP P GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 322 PPPPPPXGGWXXPPPPXGXP 263
PPPPPP PPPP P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 322 PPPPPPXGGWXXPPPPXGXP 263
PPPPP G PPPP P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 322 PPPPPPXGGWXXPPPPXG 269
PPP P GG PPPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPG 769
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +2
Query: 668 PXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPPSXXYAPPXXXXXXAPXPXXPRAXRXGGP 847
P PPP P P P + P PP P P P P A GG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 848 XXXPP 862
P
Sbjct: 791 RYYAP 795
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 584 PKTPXGRXPPLXLGGVXXXSPPXPXXEXPXXPPPXSPXGXXXPXXTPXAPXSKPSAXXPP 763
P P P PP P P PPP P P P P+
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPPAVSAGG 789
Query: 764 SXXYAP 781
S YAP
Sbjct: 790 SRYYAP 795
Score = 25.8 bits (54), Expect = 8.6
Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 134 PTSLVPHESXSPPPXXXXXGXFPPPXPKKIXXPPXHP-PFXXKKGXTXRWGGXXPPPXXG 310
P+ L+P S + PPP P + P P P G PPP G
Sbjct: 710 PSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Query: 311 GGG 319
G
Sbjct: 770 VAG 772
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 167 PPPXXXXXGXFPPPXPKKI--XXPPXHPP 247
PPP G PPP P + PP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 322 PPPPPPXGGWXXP--PPPXGXPLFXXK 248
PPPPPP G+ P PPP P + K
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 644 PPXPXXEXPXXPPPXSPXG 700
PP P E P PPP P G
Sbjct: 13 PPPPGFEPPSQPPPPPPPG 31
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,198,273
Number of Sequences: 5004
Number of extensions: 34983
Number of successful extensions: 319
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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