Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_J04
         (830 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   1.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   1.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   8.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 17  SLNSLTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLL 139
           ++ S+ PS+       L +  YY R IPD  +I K   S++
Sbjct: 622 AIKSVVPSDESHWND-LAMEFYYNRSIPDHKRIVKLRGSII 661


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 17  SLNSLTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLL 139
           ++ S+ PS+       L +  YY R IPD  +I K   S++
Sbjct: 660 AIKSVVPSDESHWND-LAMEFYYNRSIPDHKRIVKLRGSII 699


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 675 GDSRLQ*PPWGQWFRKWRI 731
           GD+ L+  P   W++ W++
Sbjct: 198 GDNMLEPSPKTPWYKGWKV 216


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 149 TPFNWENQQQISFDLLKQKL 208
           TPF W+N     F  + + L
Sbjct: 414 TPFQWDNSINAGFSKIAENL 433


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,205
Number of Sequences: 438
Number of extensions: 4708
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)