Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_I24
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 31 7.1
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.4
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 30 9.4
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 30 9.4
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 30 9.4
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 30 9.4
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 30 9.4
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 30 9.4
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 30 9.4
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 30 9.4
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 30 9.4
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 30 9.4
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 30 9.4
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 30 9.4
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 30 9.4
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 30 9.4
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 30 9.4
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 411 HGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPPA 292
HG + SP W Q + + P + P P +CCS P A
Sbjct: 256 HGGRDCSPTCWEQGKCSGPAEQEKRGPSFPKECCSQGPTA 295
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 465 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 496
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 465 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 496
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 70 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 106
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 465 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 496
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 464 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 495
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 464 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 495
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 464 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 495
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 465 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 496
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 465 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 496
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 409 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 440
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 697 GPRPPXXGGPXAPG--XGXXSRXGSRGXXXGG 786
G PP GGP PG G R G RG GG
Sbjct: 470 GMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGG 501
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSV 431
V SE LW PD+VL NA G + V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,970,440
Number of Sequences: 237096
Number of extensions: 2527855
Number of successful extensions: 8480
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8324
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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