Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_I24
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF458626-1|ABO26063.1|  560|Drosophila melanogaster nicotinic ac...    33   0.50 
AY036614-1|AAK67257.1|  219|Drosophila melanogaster nicotinic ac...    33   0.50 
AJ554210-1|CAD86936.1|  542|Drosophila melanogaster nicotinic ac...    33   0.50 
AE014298-2837|AAS65410.1|  219|Drosophila melanogaster CG32538-P...    33   0.50 
AE014298-2836|AAS65409.1|  560|Drosophila melanogaster CG32538-P...    33   0.50 
AE014298-2835|AAF48950.3|  541|Drosophila melanogaster CG32538-P...    33   0.50 
BT016139-1|AAV37024.1|  587|Drosophila melanogaster AT30209p pro...    31   2.0  
AY036613-1|AAK67256.1|  482|Drosophila melanogaster nicotinic ac...    30   3.6  
AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic ac...    30   3.6  
AE014134-2709|AAF53528.3|  263|Drosophila melanogaster CG31737-P...    30   3.6  
AE014134-2462|AAF53374.3|  570|Drosophila melanogaster CG32975-P...    30   3.6  
AE014134-2461|AAS64703.1|  808|Drosophila melanogaster CG32975-P...    30   3.6  
AE014134-2460|AAS64702.1|  786|Drosophila melanogaster CG32975-P...    30   3.6  

>EF458626-1|ABO26063.1|  560|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha7 protein.
          Length = 560

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AY036614-1|AAK67257.1|  219|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha7 subunit protein.
          Length = 219

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AJ554210-1|CAD86936.1|  542|Drosophila melanogaster nicotinic
           acetylcholine receptorsubunit Dalpha7 protein.
          Length = 542

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 115 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150


>AE014298-2837|AAS65410.1|  219|Drosophila melanogaster CG32538-PC,
           isoform C protein.
          Length = 219

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AE014298-2836|AAS65409.1|  560|Drosophila melanogaster CG32538-PA,
           isoform A protein.
          Length = 560

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AE014298-2835|AAF48950.3|  541|Drosophila melanogaster CG32538-PB,
           isoform B protein.
          Length = 541

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   RLW+PDV++ N+A     G YA    V NNGS
Sbjct: 118 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153


>BT016139-1|AAV37024.1|  587|Drosophila melanogaster AT30209p
           protein.
          Length = 587

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
 Frame = -1

Query: 793 KRXPPXXXPGTXXEXPGRN---PGXRXRPXPGAXGXXEPXXXXXPKXXPXXPRXRXXPQX 623
           K  PP    G   E PG+    PG R  P PG  G   P     P   P     R     
Sbjct: 143 KNDPPPYGQGQSFEYPGQQYSIPGPRGYPGPGPRGYPGPGPRGYPGPGPRGYPGRGPRGY 202

Query: 622 TXPVPSTXP 596
             P P   P
Sbjct: 203 PGPGPRGYP 211


>AY036613-1|AAK67256.1|  482|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha5 subunit protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424


>AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha5 subunit protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 388 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423


>AE014134-2709|AAF53528.3|  263|Drosophila melanogaster CG31737-PA
           protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -1

Query: 793 KRXPPXXXPGTXXEXPGRN---PGXRXRPXPGAXGXXEPXXXXXPKXXP 656
           K  PP    G   E PG+    PG R  P PG  G   P     P   P
Sbjct: 143 KNDPPPYGQGQSWEYPGQQYSVPGPRGYPGPGPRGYPGPGPRGYPGRGP 191


>AE014134-2462|AAF53374.3|  570|Drosophila melanogaster CG32975-PA,
           isoform A protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 340 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 375


>AE014134-2461|AAS64703.1|  808|Drosophila melanogaster CG32975-PB,
           isoform B protein.
          Length = 808

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424


>AE014134-2460|AAS64702.1|  786|Drosophila melanogaster CG32975-PC,
           isoform C protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 428
           +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,193,735
Number of Sequences: 53049
Number of extensions: 757907
Number of successful extensions: 2678
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2646
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)