Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_I24
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.35
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 31 0.80
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 31 1.1
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 31 1.1
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 31 1.1
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 1.4
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 30 1.8
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 1.8
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 4.3
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 29 4.3
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 29 5.6
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 29 5.6
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 29 5.6
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 29 5.6
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 29 5.6
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 29 5.6
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 28 7.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 9.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 9.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 9.8
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 197 HLRHANIRESESTVRILADLQMNWIDKRLSWNA 295
+L+ ++E E V ++ +L W D RLSWN+
Sbjct: 82 YLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 197 HLRHANIRESESTVRILADLQMNWIDKRLSWNA 295
+L+ + E E V ++ +L W D RLSWNA
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 327 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSV 431
+S +LWRPDV+L N+ + + Y+ R VS+NG V
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDV 138
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.80
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 197 HLRHANIRESESTVRILADLQMNWIDKRLSWNA 295
+L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 179 VVNPTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 292
+V+ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 179 VVNPTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 292
+V+ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 PTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 292
P LH+ H + I++ + +++ W+D+RL WN
Sbjct: 60 PLLHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 292
PP +++ + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQHL 319
PP +I + ++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHLAG 325
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 197 HLRHANIRESESTVRILADLQMNWIDKRLSWN 292
+L+ ++E V ++ +L W D RLSWN
Sbjct: 82 YLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 697 GPRPPXXGGPXAPGXGXXSRXGSRGXXXGGXFFXXLPXPXXXXXFXXXG-GVP 852
G PP GGP PG G G G F P P + G G+P
Sbjct: 283 GAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMP 335
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 149 IGSLPP----YSKIVVN-PTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 292
I S+PP + +N L+H + E + I L+++W D RL WN
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWN 99
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQH 316
PP ++ ++ + L H I E +++L + W D LSW G++H
Sbjct: 86 PPDGRVDISHNIELVHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKH 139
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 200 LRHANIRESESTVRILADLQMNWIDKRLSWNA 295
L+ + E V ++ ++ W D RLSWNA
Sbjct: 81 LKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 327 SSERLWRPDVVLLNAAA 377
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 PPYSKIVVNPTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 307
PP + V L L H I E + T+ +L + +W+D L+W+ G
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 170 SKIVVNPTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 319
+K+V ++ + + I E V++ ++W D +SW+ GL L
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWL 132
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 717 PXRGPXAXSNXPXXPXPRXXPPXPGNARXPXXQXXSHPRXPTRTSG 580
P P P P P P PGNA PR P G
Sbjct: 201 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPG 246
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 717 PXRGPXAXSNXPXXPXPRXXPPXPGNARXPXXQXXSHPRXPTRTSG 580
P P P P P P PGNA PR P G
Sbjct: 182 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPG 227
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = -2
Query: 732 GXGXAPXRGPXAXSNXPXXPXPRXXPPXPGNARXPXXQXXSHPRXPTRTSGK 577
G P + S+ P P P P PGN P P P SG+
Sbjct: 239 GQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGR 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,866
Number of Sequences: 27780
Number of extensions: 357638
Number of successful extensions: 1383
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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