Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_I01
(825 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.030
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 35 0.068
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.16
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.36
03_01_0515 - 3864796-3865425 32 0.48
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.84
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 31 1.5
07_01_0479 + 3606663-3607448 31 1.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.5
10_08_0221 - 15980370-15980927 30 1.9
06_03_0905 + 25843547-25844314 30 2.6
12_01_0524 - 4167867-4168445 29 3.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 3.4
08_01_0059 - 394001-394708 29 4.5
07_03_1751 - 29215074-29216270 29 4.5
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 5.9
06_01_0690 + 5033943-5034740 29 5.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.9
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 5.9
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955 28 7.8
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 7.8
06_03_0790 - 24636805-24637770 28 7.8
04_01_0530 - 6928528-6929500,6929514-6930964 28 7.8
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGA 683
P P P P P P P P P P G PP PP G G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 684 RXPXXPXXXA 713
P P A
Sbjct: 377 PPPPPPKGGA 386
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 691 GXRAPPXPXXGGPXGGXPPXPGXGXXEXXP 602
G PP P GG GG PP P G P
Sbjct: 361 GPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGA 683
P P P P P P P P P G G PP PP G +
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG--GAS 387
Query: 684 RXPXXP 701
R P P
Sbjct: 388 RPPAAP 393
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGA 683
P P P + P P P P S P P GG PP GGA
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386
Query: 684 RXP 692
P
Sbjct: 387 SRP 389
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 646 PPXGPXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPPAG 789
PP P P P P PP P P PPP G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 643 APPXGPXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPP 783
APP P P P G P PP PP P PPP
Sbjct: 325 APPPPPPPKAAPPPPP---PKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +1
Query: 628 PXRGXAPPXGPXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPPAGXXRXXX 807
P +G PP P P G PP PPP P PPP +
Sbjct: 13 PPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNF 72
Query: 808 XPG 816
PG
Sbjct: 73 GPG 75
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/84 (22%), Positives = 20/84 (23%)
Frame = +1
Query: 532 PXGXXXXXPXPXXXXPXGXXXXXPXXFXXXXXPXRGXAPPXGPXXXXXXGPXXXXXPXGX 711
P G P P G F P + PP P P
Sbjct: 44 PQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNS 103
Query: 712 PXPPXXXXXXVXXPPPXXXPXPPP 783
PP PP P PPP
Sbjct: 104 SQPPPPPPPPPSPPPSAPPPPPPP 127
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 9/62 (14%)
Frame = +1
Query: 628 PXRGXAPPXGPXXXXXXGPXXXXXPXGXPX---------PPXXXXXXVXXPPPXXXPXPP 780
P G PP P GP P P PP PPP P PP
Sbjct: 58 PPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPP 117
Query: 781 PA 786
P+
Sbjct: 118 PS 119
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 339 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 175
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 603 GXXSXXPXPGXGGXPPXGPPXXGXGGARXPXXP 701
G + P G GG PP PP G GG P P
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGGGARPPAP 135
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Frame = -3
Query: 712 AXXXGXXGXRAPPX--PXXGGPXGGXPPXPGXGXXEXXPGXXXXXXXG----XXXXGXGX 551
A G G PP P GG G PP PG G P G G G
Sbjct: 106 ARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGR 165
Query: 550 GXXAXKGNXRVGKGXGP 500
G + G G GP
Sbjct: 166 GGALGRPPGGGGGGGGP 182
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = -3
Query: 700 GXXGXRAPPXPXXGGPXGGXPPXP-----GXGXXEXXPGXXXXXXXGXXXXGXGXGXXAX 536
G G PP P GG GG P G G PG G G G G
Sbjct: 125 GGGGGARPPAPGGGG-GGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPG 183
Query: 535 KGNXRVGKGXGP 500
+ G G GP
Sbjct: 184 RAPGGGGGGGGP 195
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/95 (27%), Positives = 28/95 (29%)
Frame = -3
Query: 700 GXXGXRAPPXPXXGGPXGGXPPXPGXGXXEXXPGXXXXXXXGXXXXGXGXGXXAXKGNXR 521
G G P GG GG PG G PG G G G G
Sbjct: 163 GGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVI 222
Query: 520 VGKGXGPXVXXA*XLEC*CPAXYXGDGAXIRYTGA 416
G G G L+C G GA R G+
Sbjct: 223 GGGGGGGGA-----LKCVVGGGGGGGGALKRAAGS 252
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = -3
Query: 700 GXXGXRAPPXPXXGGPXGGXPPXPGXGXXEXXPGXXXXXXXGXXXXGXGXGXXAXKGNXR 521
G G A P GG G PG G PG G G G G
Sbjct: 150 GGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLG 209
Query: 520 VGKGXG 503
G G G
Sbjct: 210 GGGGEG 215
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +1
Query: 628 PXRGXAPPXGPXXXXXXGPXXXXX-PXGXPXPPXXXXXXVXXPPPXXXPXPPPA 786
P PP P P P P PP PPP P PPPA
Sbjct: 43 PTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPA 96
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/90 (24%), Positives = 22/90 (24%), Gaps = 3/90 (3%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPG---XGGXPPXGPPXXGX 674
P P PT P P P P P P P P PP PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 675 GGARXPXXPXXXAXXAXXXXXXCXXPPPXP 764
P P PPP P
Sbjct: 595 PNCLVPSPPPPPPPPPILPNRSVPPPPPPP 624
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/94 (24%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Frame = +1
Query: 505 PXPCXXAGSPXGXXXXXPXPXXXXPXGXXXXXPXXFXXXXXPXRGXA---PPXGPXXXXX 675
P P A +P P P P P P A PP P
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 676 XGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXP 777
P P PP V PPP P P
Sbjct: 595 PNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLP 628
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +3
Query: 549 PXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGARXPXXPXXXAXXAXX 728
P P P P PG S P P P PP G P P A
Sbjct: 689 PPPPPPPPLPPANRTNGPGVPSAPPPP------PPPPPANRSNGPSAPAPPLPPPLPAAA 742
Query: 729 XXXXCXXPPPXP 764
PPP P
Sbjct: 743 NKRNPPAPPPPP 754
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 700 PXGXPXPPXXXXXXVXXPPPXXXPXPPP 783
P P PP PPP P PPP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPP 573
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +3
Query: 516 PTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGARXPX 695
P P P P P P PG P PG PP GPP GA P
Sbjct: 282 PAAVHPQSYMHPPPPP----PPVTMPMHPGMVLAAPPPGAA--PPPGPPAMVPFGAMLPY 335
Query: 696 XPXXXAXXAXXXXXXCXXPPPXP 764
P PP P
Sbjct: 336 PPYPAVLLPPPAAATLYGRPPAP 358
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/85 (25%), Positives = 23/85 (27%)
Frame = +3
Query: 510 PLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGARX 689
P P + P P P P PG P P G PP GPP G
Sbjct: 169 PPPGQMPPPMRPPQMPIPFQRPPGVPPAF-PGGPPPPPGPFMRGPPPMGPPQVRPGMPGG 227
Query: 690 PXXPXXXAXXAXXXXXXCXXPPPXP 764
P PPP P
Sbjct: 228 PPPGMRPGMPPPPFRPGMPPPPPGP 252
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGX-GG 680
P P P+ P P P P PG P PG G GPP GG
Sbjct: 334 PPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGP-GPPPPPGAAGRGGGGPPPPALPGG 392
Query: 681 ARXPXXP 701
R P
Sbjct: 393 PRARGPP 399
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPX-PGXGGXPPXGP-PXXGXG 677
P PLP P P P P G P P PP P P
Sbjct: 287 PPPLPPSHHHHHGHHPPP-PHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGA 345
Query: 678 GARXPXXPXXXAXXAXXXXXXCXXPPPXP 764
G+ P P A A PPP P
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +3
Query: 504 PXPLPTRXFPXXAXXPXPXPXXXXPXXXXXXXPGXXSXXPXPGXGGXPPXGPPXXGXGGA 683
P P P P A P P P P PG G PP G G GG
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRP------PGPGPGPPPPPGAAGRGGGGP 384
Query: 684 RXPXXP 701
P P
Sbjct: 385 PPPALP 390
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 637 GXAPPXGPXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPPA 786
G PP P P G P PP PPP P P A
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRA 395
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = -1
Query: 696 PXXXGPXPXPXXGA--RGGGXPP 634
P GP P P GA RGGG PP
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPP 385
>10_08_0221 - 15980370-15980927
Length = 185
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = -2
Query: 797 RXXPAGGGXGXXXGGGXXTXXXXXXGGXGXPXGXXXXXGPXXXXXXGPXGGAXPRXGXXX 618
R AGGG G GGG G G G G G GG + G
Sbjct: 25 RYASAGGGGGGGGGGGGSNGGSGWGSGSGSGYGQASGDGSYASGDGGGGGGGGGQNGGSG 84
Query: 617 XXXXXGXXXXXPXGXXXXGXG 555
G G G G
Sbjct: 85 YGSGSGSGYGQAGGYGPYGGG 105
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = +1
Query: 511 PCXXAGSPXGXXXXXPXPXXXXPXGXXXXXPXXFXXXXXPXRGXAPPXGPXXXXXXGPXX 690
P G P G P P P G P P APP P GP
Sbjct: 46 PSPSPGHPKGPKNPTPRP----PKGPTYPSPVT-----RPPPLVAPPKVPVTHPPKGPVT 96
Query: 691 XXXPXGXPXPPXXXXXXVXXPPPXXXPXPP 780
P P PP V PP P PP
Sbjct: 97 RPPPVTYPTPPVTTPPVVVG-PPVTYPTPP 125
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 336 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 157
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 156 CEERVDHEGQ*C 121
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 700 PXGXPXPPXXXXXXVXXPPPXXXPXPPP 783
P G PP V PPP P PPP
Sbjct: 258 PNGSGGPPRPPPPQVPPPPPQAPPPPPP 285
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 628 PXRGXAPPXGPXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPP 783
P R PP P P P P PP PPP P PP
Sbjct: 7 PRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRP---YAPPPPSHPLAPP 55
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = -2
Query: 785 AGGGXGXXXGGGXXTXXXXXXGGXGXPXGXXXXXGPXXXXXXGPXGGAXPRXGXXXXXXX 606
AGGG G GGG G G G G G GG G
Sbjct: 137 AGGGLGGGAGGGAGAGVGGGAGAGGGAGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAG 196
Query: 605 XGXXXXXPXGXXXXGXGXXXXXPXGEPAXXQGXG 504
G G G G G G G
Sbjct: 197 GGAGVGGGAGGGAGGGGGLGGGAGGGAGGGGGLG 230
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 237 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 353
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>06_01_0690 + 5033943-5034740
Length = 265
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -2
Query: 785 AGGGXGXXXGGGXXTXXXXXXGGXGXPXGXXXXXGPXXXXXXGPXGG 645
+GGG G GGG G G G GP G GG
Sbjct: 68 SGGGGGGGGGGGGGNGGSGYGSGSGSGYGQAGGYGPYGGYAQGGGGG 114
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 549 PXPXPXXXXPXXXXXXXP-GXXSXXPXPGX-GGXPPXGPPXXGXGGARXPXXPXXXAXXA 722
P P P P G P P GG P PP G GG P P A
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP-PGAPAP 1207
Query: 723 XXXXXXCXXPPPXP 764
PPP P
Sbjct: 1208 PMPPGVPGGPPPPP 1221
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 700 GXXGXRAPPXPXXGGPXGGXPPXPGXGXXEXXP 602
G G +APP P GG PP P G P
Sbjct: 1129 GLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPP 1161
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 628 PXRGXAPPXG-PXXXXXXGPXXXXXPXGXPXPPXXXXXXVXXPPPXXXPXPPPAGXXR 798
P R PP P P P P PP V PPP P P PA R
Sbjct: 108 PYRPPPPPRKKPQFQPPPQPPRAWDP-SPPPPPPAPAAPVLVPPPAPAPRPAPAPAPR 164
>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
Length = 184
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = -2
Query: 797 RXXPAGGGXGXXXGGGXXTXXXXXXGGXGXPXGXXXXXGPXXXXXXGP-XGGAXPRXG 627
R AGGG G GGG G G G G G GGA R G
Sbjct: 25 RYASAGGGGGGGGGGGGSNGGSGWGSGSGSGYGQASGGGAYASGGGGAGGGGAWTRHG 82
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 243 VHRANTGRSSNELDRQTTELERRGVG 320
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 812 GXXXXRXXPAGGGXGXXXGGGXXTXXXXXXGGXGXPXGXXXXXGPXXXXXXGPXGG 645
G R GGG G GGG GG G G G G GG
Sbjct: 116 GGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGDNGDDGEDGDGDAGGRGG 171
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 72 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 212
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.137 0.459
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,444,649
Number of Sequences: 37544
Number of extensions: 509484
Number of successful extensions: 3157
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2712
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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