Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_H23
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 66 5e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 4e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 2e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 4e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 3e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 8e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 8e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.001
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.27
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.83
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.83
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 65.7 bits (153), Expect = 5e-13
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +3
Query: 75 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 233
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 234 VRILADPQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 407
+ + + W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVWLEHE--WQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 408 VSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMD 551
+ G V W + + + +P D QTC KFGS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.5 bits (145), Expect = 4e-12
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +3
Query: 93 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 251
C + D LL+ Y++ P + LT+ ++ N++ T + +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 252 PQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 425
+W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 79 --QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 426 VSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMD 551
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Frame = +3
Query: 171 KIVVNLTL-HLRHANIRESESTVRILADPQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 344
K+ VN L ++ N+ E ++ + W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 345 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTF 512
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 513 KFGSRMHXSDEMDFVI--DKRIYSM---FXSGAWDVTDL 614
KFGS D++ + +K + + SG WD+ ++
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 60.5 bits (140), Expect = 2e-11
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADPQMNW 266
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 267 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 437
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 438 KRLDISTPISM*LDNWPNDMQTCTFKFGS 524
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 60.5 bits (140), Expect = 2e-11
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Frame = +3
Query: 96 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADPQMN 263
++ T+L + L YD P S +I N+T+ L + + S + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 264 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 431
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 432 WIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVIDKRIYSM 581
+ + + +WP D C FGS +H +E++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 3e-11
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +3
Query: 120 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADP---QMNWIDKRLS 284
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ + +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 285 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 458
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 459 PISM*LDNWPNDMQTCTFKFGSRMHXSDEMD 551
+ ++ +P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.7 bits (138), Expect = 3e-11
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Frame = +3
Query: 63 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 221
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 222 SESTVRILADPQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 398
T + + + W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVWVEQE--WNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 399 ----RARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.7 bits (138), Expect = 3e-11
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADPQMNWIDKR 278
+ D LL+ Y+R P LT+ L N++ T + + + W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQR--WNDYK 94
Query: 279 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 443
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 444 LDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMD 551
+ + ++ +P D Q+C KFGS + ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 4e-11
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 4e-11
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSV 428
++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSV 428
++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.2 bits (132), Expect = 2e-10
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 120 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADP---QMNWIDKRLS 284
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ + +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 285 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 449
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 450 ISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMD 551
+ S+ ++ +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 77 KLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTC 136
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVIDKR----IYSMFXSGA 596
++ + + + +P D Q C KFGS + ++D + I S +G
Sbjct: 137 LYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGE 196
Query: 597 WDV 605
WD+
Sbjct: 197 WDL 199
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 428
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 40 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
Query: 429 SWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFVI 560
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 100 LYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.4 bits (120), Expect = 5e-09
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Frame = +3
Query: 93 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADPQ 257
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV +
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 258 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 428
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 429 SWIKRLDISTPISM*LDN--WPNDMQTCTFKFGSRMHXSDEM 548
+ TP+ D+ WP D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPVCE-YDHTWWPYDILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +3
Query: 264 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 434
W D L WNA E+ G V R+WRPD +L N A + VS+ G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 435 IKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
+ + + ++ +P D Q C K+ S
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.0 bits (114), Expect = 3e-08
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 203
++LL FLL + + + ++D++L YD E+ D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 204 H-ANIRESESTVRILADPQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 374
A I + + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 375 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDE 545
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 546 MDFV 557
+ F+
Sbjct: 188 LVFL 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 8e-08
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 108 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADPQMNWID 272
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 273 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 443
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 444 LDISTPISM*LDNWPNDMQTCTFKFGS 524
L I M L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 203
++LL FLL + + + ++D++L YD E+ D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 204 H-ANIRESESTVRILADPQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 374
+ I + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 375 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDE 545
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 546 MDFV 557
+ F+
Sbjct: 188 LVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADPQMNW 266
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 267 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 419
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 420 GSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.9 bits (94), Expect = 7e-06
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADPQMNW 266
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 267 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 419
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 420 GSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 8e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 434
W D+RL+++ E + +E++W PD N + D R R+S +GSV++
Sbjct: 92 WKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTY 151
Query: 435 IKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
R + M L +P D Q CT + S
Sbjct: 152 GMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.9 bits (79), Expect = 4e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 416
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 417 NGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGS 524
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 336 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISM*LDNWPNDMQTC 506
+WRPD NA T + ++ + ++ ++ ++ +L + +M +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 507 TFKFGSRMHXSDEMDFV 557
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 194
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 195 HLRHANIRESESTVRILADPQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 365
L A+ ES + Q W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 366 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDE 545
R+ NG+V+++ R + L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 546 MDFV 557
+ +V
Sbjct: 214 ITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 194
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 195 HLRHANIRESESTVRILADPQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 365
L A+ ES + Q W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 366 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDE 545
R+ NG+V+++ R + L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 546 MDFV 557
+ +V
Sbjct: 214 ITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 194
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 195 HLRHANIRESESTVRILADPQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 365
L A+ ES + Q W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 366 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDE 545
R+ NG+V+++ R + L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 546 MDFV 557
+ +V
Sbjct: 214 ITYV 217
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.002
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 330 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISM*LDNWPNDMQ 500
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 501 TCTFKFGSRMHXSDEMDFVID 563
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 26.6 bits (56), Expect = 0.27
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Frame = +3
Query: 255 QMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGS 425
Q W D RL + N ++ + + +W PD ++ R+ NG+
Sbjct: 165 QQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGT 224
Query: 426 VSWIKRLDISTPISM*LDNWPNDMQTCTFKFGSRMHXSDEMDFV 557
V+++ R + L+ +P D C+F S + + +V
Sbjct: 225 VNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.83
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 330 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISM*LDNWPND 494
+ LW+PD LNA + AL + S+ N +V + R+ M +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 495 MQTC 506
+Q C
Sbjct: 127 IQIC 130
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.83
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 39 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 143
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 317 PSAAAPFPCVPTQS 276
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,588
Number of Sequences: 438
Number of extensions: 4669
Number of successful extensions: 88
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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