Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_H07
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 9e-09
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 57 2e-08
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.002
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 31 1.2
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 28 6.5
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 60.1 bits (139), Expect = 2e-09
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Frame = +1
Query: 13 GVPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATM 186
GVPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ A+ +
Sbjct: 76 GVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTE-SENNLQSALDAV 134
Query: 187 GQWFRKWRIDINPTKSAAVPFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSK 366
W + ++ +N +K T + + RR + L G PI +
Sbjct: 135 VDWTKGSKLTLNQSK--------------TVHVTVGKRRIDFK----YHLDGYPIERKAI 176
Query: 367 VKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMT 546
+ LG + + F H + + A F L ++ + +K + + LYKT IRP +
Sbjct: 177 TRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNK---KLMILLYKTFIRPRLE 233
Query: 547 Y 549
Y
Sbjct: 234 Y 234
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 57.6 bits (133), Expect = 9e-09
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Frame = +1
Query: 10 AGVPQGSALSPLLFSLYIND--IPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVAT 183
+GVPQGS PLLF L+IN+ I +P +++ FADD I+++ +++ + I V+
Sbjct: 879 SGVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIVS- 935
Query: 184 MGQWFRKWRIDINPTKSAAVPFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVS 363
W + + + PTKSA + L +R N S ++ G PI S
Sbjct: 936 ---WSKLNELPLAPTKSAL--------------LALGTRNKNQS----YSVDGVPITPSS 974
Query: 364 KVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVM 543
V+ LG+ D + F HI V + + R +L + S S + LYKT + P+M
Sbjct: 975 TVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIM 1031
Query: 544 TY 549
Y
Sbjct: 1032 NY 1033
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/138 (27%), Positives = 65/138 (47%)
Frame = +1
Query: 7 LAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATM 186
L GVPQGS +SP LF+ Y+ D+P +T L +ADD +I +K+ ++Q+ + +
Sbjct: 530 LGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEI 589
Query: 187 GQWFRKWRIDINPTKSAAVPFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSK 366
++ ++ + I+ KS F S P + I PIP ++
Sbjct: 590 AKYLKERGMSISAEKSTVTVF---------SCDPKEHK-----TKPDIYWMDDPIPVINA 635
Query: 367 VKYLGVTLDRGMTFRPHI 420
K LG+TL+ + H+
Sbjct: 636 PKLLGITLNTMTGTKDHV 653
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.002
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Frame = +1
Query: 10 AGVPQGSALSPLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKMSLLHRRLQIAVAT 183
+GVP+GS P LF ++IN + S P + FADD +Y + +Q +
Sbjct: 55 SGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVYSHSPPL------IQTTIDL 108
Query: 184 MGQWFRKWRIDINPTKSAAVPFKRGRPPN-------ITSSIPLRSRRANTSAVS------ 324
+ W ++ + K AA+ K G N + +S+ R A+ + VS
Sbjct: 109 ITTWSENNKLPLAVHK-AALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGVSTVAHSK 167
Query: 325 ----------PITLF---GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLY 465
P T++ PI + + LG+ D +TF+PHIK + + L R
Sbjct: 168 TCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCK 224
Query: 466 PMLCSRSKLSLRNKVTLYKTCIRPVMTY 549
+L S L L+KT I P++ Y
Sbjct: 225 QLLKSFKSLCPEFYCNLFKTYILPLIEY 252
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 334 LFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVT 513
L G PI + + LG + + F H K + A F L ++ + +K + +
Sbjct: 136 LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---IL 192
Query: 514 LYKTCIRPVMTY 549
LYKT IRP + Y
Sbjct: 193 LYKTFIRPRLEY 204
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 216 VYSPLPEPLSHGGYCDLESPMKQRHLPTRVVDS 118
VYSP+P P H G + S M T V DS
Sbjct: 13 VYSPVPSPSYHNGRSMVSSDMYTYTTDTNVTDS 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,807,331
Number of Sequences: 27780
Number of extensions: 399182
Number of successful extensions: 1000
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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